NKX2-1-AS1 Gene

Name NKX2-1 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nNKX2-1-AS1 is a long noncoding RNA implicated in cancer progression by acting as a competing endogenous RNA. In gastric cancer, its upregulation is associated with enhanced tumor proliferation, invasion, metastasis, and angiogenesis. Mechanistically, NKX2-1-AS1 functions by sponging microRNA‐145-5p, which in turn de-represses serpin family E member 1 (SERPINE1) expression. The increase in SERPINE1 subsequently activates the VEGFR-2 signaling pathway, all of which contribute to tumor progression and aggressive angiogenic behavior."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its role in gastric cancer, NKX2-1-AS1 is highly expressed in lung adenocarcinoma, where it facilitates lymphangiogenesis—a key process in lymphatic metastasis. Functional studies in lung adenocarcinoma cell lines have shown that silencing NKX2-1-AS1 suppresses cell proliferation, migration, and the expression of key lymphangiogenesis-related factors. This RNA exerts its action by binding to the transcription factor ERG, thereby regulating the transcription of fatty acid binding protein 4 (FABP4), which is critical for promoting tube formation in lymphatic endothelial cells."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Fei Teng, Ju-Xiang Zhang, Yi Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA NKX2-1-AS1 promotes tumor progression and angiogenesis via upregulation of SERPINE1 expression and activation of the VEGFR-2 signaling pathway in gastric cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Oncol (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/1878-0261.12911"}], "href": "https://doi.org/10.1002/1878-0261.12911"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33512745"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33512745"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ting Tao, Hui Chen, Qimei Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "NKX2-1-AS1 promotes the lymphangiogenesis of lung adenocarcinoma through regulation of ERG-mediated FABP4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Tissue Cell (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.tice.2024.102314"}], "href": "https://doi.org/10.1016/j.tice.2024.102314"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38309204"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38309204"}]}]}]}
NCBI Gene ID 100506237
API
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Predicted Functions View NKX2-1-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View NKX2-1-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View NKX2-1-AS1's ARCHS4 Predicted Functions.

Functional Associations

NKX2-1-AS1 has 154 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.

Click the + buttons to view associations for NKX2-1-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of NKX2-1-AS1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of NKX2-1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of NKX2-1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of NKX2-1-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of NKX2-1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.