NLRP2B Gene

Name NLR family pyrin domain containing 2B
Description Involved in several processes, including negative regulation of NF-kappaB transcription factor activity; negative regulation of peptidyl-serine phosphorylation; and negative regulation of signal transduction. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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Loss of SSPN has been shown to decrease the abundance of adhesion complexes, impair laminin binding, and disrupt Ca2+ handling—factors that contribute to increased susceptibility to contraction-induced injury and enhanced infarct size during ischemia-reperfusion injury. Furthermore, compensatory regulation via integrin modulation by SSPN helps preserve extracellular matrix attachment and force transmission in both normal and dystrophic contexts."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional work indicates that SSPN contributes to cellular survival under environmental stress such as hypoxia. Its downregulation correlates with increased cell death in hypoxic conditions, while overexpression of the native mouse SSPN variant safely improves the stability of the sarcolemma and ameliorates dystrophic pathology in experimental models. Although the studies provided do not directly address “NLRP2B,” the comprehensive characterization of SSPN functions—including its roles in signal transduction, protein trafficking, and membrane stabilization—provides an important framework for understanding similar transmembrane proteins involved in maintaining muscle integrity."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "7", "end_ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Dan Zhou, Jiyi Wang, Matthew A Zapala, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Gene expression in mouse brain following chronic hypoxia: role of sarcospan in glial cell death."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Physiol Genomics (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/physiolgenomics.00147.2007"}], "href": "https://doi.org/10.1152/physiolgenomics.00147.2007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18056785"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18056785"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jamie L Marshall, Johan Holmberg, Eric Chou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sarcospan-dependent Akt activation is required for utrophin expression and muscle regeneration."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.201110032"}], "href": "https://doi.org/10.1083/jcb.201110032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22734004"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22734004"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jamie L Marshall, Jennifer Oh, Eric Chou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sarcospan integration into laminin-binding adhesion complexes that ameliorate muscular dystrophy requires utrophin and α7 integrin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddu615"}], "href": "https://doi.org/10.1093/hmg/ddu615"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25504048"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25504048"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jamie L Marshall, Eric Chou, Jennifer Oh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dystrophin and utrophin expression require sarcospan: loss of α7 integrin exacerbates a newly discovered muscle phenotype in sarcospan-null mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/dds271"}], "href": "https://doi.org/10.1093/hmg/dds271"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22798625"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22798625"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Michelle S Parvatiyar, Jamie L Marshall, Reginald T Nguyen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sarcospan Regulates Cardiac Isoproterenol Response and Prevents Duchenne Muscular Dystrophy-Associated Cardiomyopathy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Am Heart Assoc (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/JAHA.115.002481"}], "href": "https://doi.org/10.1161/JAHA.115.002481"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26702077"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26702077"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Hyun Seok Hwang, Aida Rahimi Kahmini, Julia Prascak, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sarcospan Deficiency Increases Oxidative Stress and Arrhythmias in Hearts after Acute Ischemia-Reperfusion Injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms241411868"}], "href": "https://doi.org/10.3390/ijms241411868"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37511627"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37511627"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Elizabeth M Gibbs, Jamie L Marshall, Eva Ma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "High levels of sarcospan are well tolerated and act as a sarcolemmal stabilizer to address skeletal muscle and pulmonary dysfunction in DMD."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddw356"}], "href": "https://doi.org/10.1093/hmg/ddw356"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27798107"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27798107"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Angela K Peter, Gaynor Miller, Joana Capote, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Nanospan, an alternatively spliced isoform of sarcospan, localizes to the sarcoplasmic reticulum in skeletal muscle and is absent in limb girdle muscular dystrophy 2F."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Skelet Muscle (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13395-017-0127-9"}], "href": "https://doi.org/10.1186/s13395-017-0127-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28587652"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28587652"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Elizabeth M Gibbs, Jackie L McCourt, Kara M Shin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of sarcospan exacerbates pathology in mdx mice, but does not affect utrophin amelioration of disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddaa264"}], "href": "https://doi.org/10.1093/hmg/ddaa264"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33432327"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33432327"}]}]}]}
NCBI Gene ID 286430
API
Download Associations
Predicted Functions View NLRP2B's ARCHS4 Predicted Functions.
Co-expressed Genes View NLRP2B's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View NLRP2B's ARCHS4 Predicted Functions.

Functional Associations

NLRP2B has 1,374 functional associations with biological entities spanning 5 categories (chemical, functional term, phrase or reference, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 26 datasets.

Click the + buttons to view associations for NLRP2B from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of NLRP2B gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of NLRP2B gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of NLRP2B gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
CM4AI U2OS Cell Map Protein Localization Assemblies assemblies containing NLRP2B protein from integrated AP-MS and IF data from the CM4AI U2OS Cell Map Protein Localization Assemblies dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing NLRP2B protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with NLRP2B protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with NLRP2B gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
GO Biological Process Annotations 2025 biological processes involving NLRP2B gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2025 cellular components containing NLRP2B protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by NLRP2B gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of NLRP2B gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
GWAS Catalog SNP-Phenotype Associations 2025 phenotypes associated with NLRP2B gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of NLRP2B gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of NLRP2B gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
KEGG Pathways 2026 pathways involving NLRP2B protein from the KEGG Pathways 2026 dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of NLRP2B gene from the NIBR DRUG-seq U2OS MoA Box dataset.
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of NLRP2B gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of NLRP2B gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset.
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures gene perturbations changing expression of NLRP2B gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of NLRP2B gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of NLRP2B gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of NLRP2B gene from the RummaGEO Gene Perturbation Signatures dataset.
Sci-Plex Drug Perturbation Signatures drug perturbations changing expression of NLRP2B gene from the Sci-Plex Drug Perturbation Signatures dataset.
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 tissues with high expression of NLRP2B protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 tissues with high expression of NLRP2B protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with NLRP2B protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.