| Name | notch 2 N-terminal like A |
| Description | Enables Notch binding activity. Involved in cerebral cortex development and positive regulation of Notch signaling pathway. Predicted to be located in cytoplasm and extracellular region. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nHuman‐specific NOTCH2NL paralogs are prominently expressed in radial glia, where they modulate Notch signaling by directly interacting with Notch receptors. By enhancing Notch pathway activity, these genes delay the differentiation of neuronal progenitors, thereby extending the period of cortical stem cell proliferation and contributing to the expansion of the human neocortex. Importantly, variations in NOTCH2NL dosage have been linked to neurodevelopmental disorders, with duplications at the 1q21.1 locus associated with macrocephaly and autism, and deletions linked to microcephaly and schizophrenia."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n \n"}, {"type": "p", "children": [{"type": "t", "text": "\nComparative evolutionary analyses reveal that archaic hominins such as Neanderthals and Denisovans harbored unique protein‐coding variants and gene configurations within the NOTCH2NL family. These differences may have altered the capacity of NOTCH2NL to activate Notch signaling, suggesting that shifts in its functional output contributed to divergent patterns of brain development and evolution among hominin lineages."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n \n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurther genetic scrutiny in modern human populations indicates ongoing adaptive evolution of NOTCH2NL, with structural variants emerging that modulate its expression levels toward an optimal dosage. This balance appears critical for maximizing the benefits of increased neuronal production while minimizing the risk of genomic instability and associated neurodevelopmental disorders."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}]}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Ian T Fiddes, Gerrald A Lodewijk, Meghan Mooring, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Human-Specific NOTCH2NL Genes Affect Notch Signaling and Cortical Neurogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cell.2018.03.051"}], "href": "https://doi.org/10.1016/j.cell.2018.03.051"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29856954"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29856954"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Gerrald A Lodewijk, Diana P Fernandes, Iraklis Vretzakis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Evolution of Human Brain Size-Associated NOTCH2NL Genes Proceeds toward Reduced Protein Levels."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Evol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/molbev/msaa104"}], "href": "https://doi.org/10.1093/molbev/msaa104"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32330268"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32330268"}]}]}]}
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| NCBI Gene ID | 388677 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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NOTCH2NLA has 958 functional associations with biological entities spanning 5 categories (disease, phenotype or trait, chemical, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.
Click the + buttons to view associations for NOTCH2NLA from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CellMarker Gene-Cell Type Associations | cell types associated with NOTCH2NLA gene from the CellMarker Gene-Cell Type Associations dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of NOTCH2NLA gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| DISEASES Curated Gene-Disease Association Evidence Scores 2025 | diseases involving NOTCH2NLA gene from the DISEASES Curated Gene-Disease Association Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with NOTCH2NLA gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GlyGen Glycosylated Proteins | ligands (chemical) binding NOTCH2NLA protein from the GlyGen Glycosylated Proteins dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of NOTCH2NLA gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of NOTCH2NLA gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
| Reactome Pathways 2024 | pathways involving NOTCH2NLA protein from the Reactome Pathways 2024 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of NOTCH2NLA gene from the Rummagene Transcription Factor Associations 2026 dataset. | |