HGNC Family | Non-coding RNAs |
Name | OTX2 antisense RNA 1 (head to head) |
Synonyms | OTX2OS1 |
NCBI Gene ID | 100309464 |
API | |
Download Associations | |
Predicted Functions |
![]() |
Co-expressed Genes |
![]() |
Expression in Tissues and Cell Lines |
![]() |
OTX2-AS1 has 533 functional associations with biological entities spanning 7 categories (molecular profile, organism, functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 22 datasets.
Click the + buttons to view associations for OTX2-AS1 from the datasets below.
If available, associations are ranked by standardized value
Dataset | Summary | |
---|---|---|
BioGPS Mouse Cell Type and Tissue Gene Expression Profiles | cell types and tissues with high or low expression of OTX2-AS1 gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset. | |
CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of OTX2-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of OTX2-AS1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of OTX2-AS1 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
ChEA Transcription Factor Targets | transcription factors binding the promoter of OTX2-AS1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of OTX2-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at OTX2-AS1 gene from the ENCODE Histone Modification Site Profiles dataset. | |
ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of OTX2-AS1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
ENCODE Transcription Factor Targets | transcription factors binding the promoter of OTX2-AS1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing OTX2-AS1 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
GEO Signatures of Differentially Expressed Genes for Diseases | disease perturbations changing expression of OTX2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset. | |
GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of OTX2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of OTX2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of OTX2-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
GTEx Tissue Gene Expression Profiles | tissues with high or low expression of OTX2-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
GWASdb SNP-Disease Associations | diseases associated with OTX2-AS1 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset. | |
GWASdb SNP-Phenotype Associations | phenotypes associated with OTX2-AS1 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset. | |
JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of OTX2-AS1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of OTX2-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of OTX2-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles | cell types and tissues with high or low DNA methylation of OTX2-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset. | |
Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at OTX2-AS1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |