PCED1B-AS1 Gene

Name PCED1B antisense RNA 1
Summary
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In PDAC, its overexpression is correlated with advanced clinical stage and lymph node metastasis; mechanistic studies reveal that PCED1B‑AS1 sponges miR‑411‑3p, leading to the upregulation of hypoxia inducible factor‑1α which in turn enhances cell proliferation, invasion, and epithelial–mesenchymal transition. Similarly, in GC, PCED1B‑AS1 promotes cell proliferation, migration, invasion, and EMT by binding to miR‑215‑3p and upregulating CXCR1 expression."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn hepatocellular carcinoma (HCC), increased PCED1B‑AS1 expression is associated with poor patient survival. Here, PCED1B‑AS1 decreases miR‑10a levels, resulting in the enhanced expression of BCL6 and subsequent promotion of cell proliferation. Additionally, preliminary research in osteosarcoma implies a tumor‑promoting role for PCED1B‑AS1, while its diagnostic potential has been explored in proliferative diabetic retinopathy. Together, these findings underscore the multifaceted functions of PCED1B‑AS1 in oncogenesis and suggest its utility both as a prognostic biomarker and as a potential therapeutic target in a range of human cancers."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jinghui Yang, Duo Yu, Xueshibojie Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA PCED1B-AS1 activates the proliferation and restricts the apoptosis of glioma through cooperating with miR-194-5p/PCED1B axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.29417"}], "href": "https://doi.org/10.1002/jcb.29417"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31680313"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31680313"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yi Zhang, Huan Ma, Chang Chen "}, {"type": "b", "children": [{"type": "t", "text": "Long non‑coding RNA PCED1B‑AS1 promotes pancreatic ductal adenocarcinoma progression by regulating the miR‑411‑3p/HIF‑1α axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/or.2021.8085"}], "href": "https://doi.org/10.3892/or.2021.8085"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34036383"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34036383"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Junyu Ren, Ning Xu, Ruize Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA PCED1B antisense RNA 1 promotes gastric cancer progression via modulating microRNA-215-3p / C-X-C motif chemokine receptor 1 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2021.1971503"}], "href": "https://doi.org/10.1080/21655979.2021.1971503"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34516330"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34516330"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Haitao Ding, Juan He, Weili Xiao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA PCED1B-AS1 Upregulation in Hepatocellular Carcinoma and Regulation of the miR-10a/BCL6 Axis to Promote Cell Proliferation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Crit Rev Eukaryot Gene Expr (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1615/CritRevEukaryotGeneExpr.2022039954"}], "href": "https://doi.org/10.1615/CritRevEukaryotGeneExpr.2022039954"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35997114"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35997114"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Bing Wang, Li Yao, Yuefu Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA PCED1B-AS1 knockdown inhibits osteosarcoma via methylation-mediated miR-10a downregulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Orthop Surg Res (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13018-022-03284-1"}], "href": "https://doi.org/10.1186/s13018-022-03284-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36274134"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36274134"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Xuyang Wang, Wangling Chen, Wei Lao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Upregulation of PCED1B-AS1 in proliferative diabetic retinopathy and its involvement in retinal vascular endothelial cell proliferation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Ophthalmol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12886-022-02683-6"}], "href": "https://doi.org/10.1186/s12886-022-02683-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36418980"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36418980"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Jian-Gang Bi, Qi Li, Yu-Sheng Guo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Non-coding RNA PCED1B Antisense RNA 1 Promotes Cell Proliferation and Invasion in Hepatocellular Carcinoma by Regulating the MicroRNA-34a/CD44 Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Med Sci (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11596-023-2823-5"}], "href": "https://doi.org/10.1007/s11596-023-2823-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38748366"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38748366"}]}]}]}
NCBI Gene ID 100233209
API
Download Associations
Predicted Functions View PCED1B-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View PCED1B-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PCED1B-AS1's ARCHS4 Predicted Functions.

Functional Associations

PCED1B-AS1 has 745 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for PCED1B-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of PCED1B-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of PCED1B-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with PCED1B-AS1 gene from the CellMarker Gene-Cell Type Associations dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of PCED1B-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of PCED1B-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of PCED1B-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of PCED1B-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of PCED1B-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PCED1B-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of PCED1B-AS1 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of PCED1B-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of PCED1B-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.