PGM5-AS1 Gene

Name PGM5 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent investigations have identified Homo sapiens PGM5 antisense RNA 1 (PGM5‐AS1) as a novel long non‐coding RNA that functions as a tumor suppressor in esophageal squamous cell carcinoma (ESCC). PGM5‐AS1 is markedly downregulated in ESCC tissues, plasma, and cell lines; its low expression correlates with poor differentiation, advanced tumor node metastasis stage, and lymph node metastasis. Functional experiments demonstrated that restoration of PGM5‐AS1 significantly suppresses cell proliferation, migration, and invasion in vitro, as well as tumor growth in vivo. Mechanistically, PGM5‐AS1 is transcriptionally activated by p53 and exerts its tumor‐suppressive effects by directly binding to and sequestering miR‐466, which in turn elevates PTEN expression and thereby inhibits ESCC progression. These findings suggest that PGM5‐AS1 not only serves as an effective diagnostic and prognostic biomarker for ESCC but also represents a promising therapeutic target for the treatment of this malignancy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Zhao Zhihua, Wang Weiwei, Niu Lihua, et al. "}, {"type": "b", "children": [{"type": "t", "text": "p53-induced long non-coding RNA PGM5-AS1 inhibits the progression of esophageal squamous cell carcinoma through regulating miR-466/PTEN axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "IUBMB Life (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/iub.2069"}], "href": "https://doi.org/10.1002/iub.2069"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31185143"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31185143"}]}]}]}
Synonyms FAM233A
NCBI Gene ID 572558
API
Download Associations
Predicted Functions View PGM5-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View PGM5-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PGM5-AS1's ARCHS4 Predicted Functions.

Functional Associations

PGM5-AS1 has 967 functional associations with biological entities spanning 5 categories (organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.

Click the + buttons to view associations for PGM5-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of PGM5-AS1 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of PGM5-AS1 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of PGM5-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of PGM5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of PGM5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of PGM5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of PGM5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of PGM5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of PGM5-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of PGM5-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PGM5-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of PGM5-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of PGM5-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of PGM5-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.