| Name | PLCH1 antisense RNA 1 |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA careful review of the provided abstracts does not reveal any mention of PLCH1‐AS1. Instead, these studies focus predominantly on the role of the zinc metallopeptidase ZMPSTE24—which is essential for processing the farnesylated prelamin A precursor into mature lamin A—to maintain nuclear envelope integrity, proper chromatin organization, and genomic stability. Disruption in ZMPSTE24 function leads to nuclear abnormalities that are associated with premature aging syndromes, such as Hutchinson–Gilford progeria, and other laminopathies. These reports demonstrate that defects in prelamin A processing compromise DNA repair fidelity and activate stress pathways, ultimately contributing to accelerated aging phenotypes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther abstracts delve into the cellular consequences of ZMPSTE24 deficiency, reporting outcomes such as delayed recruitment of DNA repair proteins, altered histone modifications and epigenetic marks, and activation of cell cycle checkpoints and senescence pathways. These molecular and phenotypic changes translate into systemic effects including muscle weakness, osteoporosis, metabolic alterations, and even resistance to fibrosis under certain conditions. Taken together, the studies highlight how impaired prelamin A processing contributes to genomic instability and deregulated cellular homeostasis, fueling multiple premature aging and degenerative disease processes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "15"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nA further subset of these articles extends the functional repertoire of ZMPSTE24 beyond nuclear homeostasis to include roles in host defense mechanisms. In particular, ZMPSTE24 partners with interferon‐induced transmembrane proteins to restrict the entry of multiple enveloped viruses—including influenza and coronaviruses—by impeding virus–cell fusion. These antiviral functions appear independent of its catalytic activity and highlight the enzyme’s involvement in broader metabolic and inflammatory pathways that could be exploited therapeutically. Nonetheless, throughout all these studies there is no indication that PLCH1‐AS1 is functionally implicated in these processes, leaving its role unaddressed by the current literature."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "16", "end_ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Alberto M Pendás, Zhongjun Zhou, Juan Cadiñanos, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Defective prelamin A processing and muscular and adipocyte alterations in Zmpste24 metalloproteinase-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ng871"}], "href": "https://doi.org/10.1038/ng871"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11923874"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11923874"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Martin O Bergo, Bryant Gavino, Jed Ross, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Zmpste24 deficiency in mice causes spontaneous bone fractures, muscle weakness, and a prelamin A processing defect."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.192460799"}], "href": "https://doi.org/10.1073/pnas.192460799"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12235369"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12235369"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Loren G Fong, Jennifer K Ng, Margarita Meta, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Heterozygosity for Lmna deficiency eliminates the progeria-like phenotypes in Zmpste24-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0408558102"}], "href": "https://doi.org/10.1073/pnas.0408558102"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15608054"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15608054"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Baohua Liu, Jianming Wang, Kui Ming Chan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Genomic instability in laminopathy-based premature aging."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Med (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nm1266"}], "href": "https://doi.org/10.1038/nm1266"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15980864"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15980864"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Ignacio Varela, Juan Cadiñanos, Alberto M Pendás, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Accelerated ageing in mice deficient in Zmpste24 protease is linked to p53 signalling activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature04019"}], "href": "https://doi.org/10.1038/nature04019"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16079796"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16079796"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Catherine Coffinier, Sarah E Hudon, Roger Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A potent HIV protease inhibitor, darunavir, does not inhibit ZMPSTE24 or lead to an accumulation of farnesyl-prelamin A in cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M709629200"}], "href": "https://doi.org/10.1074/jbc.M709629200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18230615"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18230615"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Guillermo Mariño, Alejandro P Ugalde, Natalia Salvador-Montoliu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Premature aging in mice activates a systemic metabolic response involving autophagy induction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddn120"}], "href": "https://doi.org/10.1093/hmg/ddn120"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18443001"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18443001"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Fernando G Osorio, Ignacio Varela, Ester Lara, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Nuclear envelope alterations generate an aging-like epigenetic pattern in mice deficient in Zmpste24 metalloprotease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging Cell (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1474-9726.2010.00621.x"}], "href": "https://doi.org/10.1111/j.1474-9726.2010.00621.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20961378"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20961378"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Vaidehi Krishnan, Maggie Zi Ying Chow, Zimei Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Histone H4 lysine 16 hypoacetylation is associated with defective DNA repair and premature senescence in Zmpste24-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1102789108"}], "href": "https://doi.org/10.1073/pnas.1102789108"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21746928"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21746928"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Rika Imai, Kanae Asai, Jun-ichi Hanai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Transgenic mice overexpressing glia maturation factor-β, an oxidative stress inducible gene, show premature aging due to Zmpste24 down-regulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.100779"}], "href": "https://doi.org/10.18632/aging.100779"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26232943"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26232943"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Bishi Fu, Lingyan Wang, Shitao Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ZMPSTE24 defends against influenza and other pathogenic viruses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Med (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1084/jem.20161270"}], "href": "https://doi.org/10.1084/jem.20161270"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28246125"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28246125"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Shitao Li, Bishi Fu, Lingyan Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ZMPSTE24 Is Downstream Effector of Interferon-Induced Transmembrane Antiviral Activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "DNA Cell Biol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/dna.2017.3791"}], "href": "https://doi.org/10.1089/dna.2017.3791"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28594571"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28594571"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Chun-Long Zhang, Xinguang Liu, Qiu-Jing He, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR‑342‑5p promotes Zmpste24‑deficient mouse embryonic fibroblasts proliferation by suppressing GAS2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Med Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3892/mmr.2017.7731"}], "href": "https://doi.org/10.3892/mmr.2017.7731"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28990109"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28990109"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Jazmín Calyeca, Yalbi I Balderas-Martínez, Raúl Olmos, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Accelerated aging induced by deficiency of Zmpste24 protects old mice to develop bleomycin-induced pulmonary fibrosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.101679"}], "href": "https://doi.org/10.18632/aging.101679"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30530916"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30530916"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Ying Ao, Jie Zhang, Zuojun Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lamin A buffers CK2 kinase activity to modulate aging in a progeria mouse model."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Adv (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/sciadv.aav5078"}], "href": "https://doi.org/10.1126/sciadv.aav5078"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30906869"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30906869"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Patrick J Heizer, Ye Yang, Yiping Tu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deficiency in ZMPSTE24 and resulting farnesyl-prelamin A accumulation only modestly affect mouse adipose tissue stores."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Lipid Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1194/jlr.RA119000593"}], "href": "https://doi.org/10.1194/jlr.RA119000593"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31941672"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31941672"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Yuexia Wang, Khurts Shilagardi, Trunee Hsu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Abolishing the prelamin A ZMPSTE24 cleavage site leads to progeroid phenotypes with near-normal longevity in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.2118695119"}], "href": "https://doi.org/10.1073/pnas.2118695119"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35197292"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35197292"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Khurts Shilagardi, Eric D Spear, Rachy Abraham, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Integral Membrane Protein ZMPSTE24 Protects Cells from SARS-CoV-2 Spike-Mediated Pseudovirus Infection and Syncytia Formation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "mBio (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1128/mbio.02543-22"}], "href": "https://doi.org/10.1128/mbio.02543-22"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36197088"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36197088"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Jae-Byoung Chae, Chul-Woo Park, Hyeong Min Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Accelerated aging phenotypes in the retinal pigment epithelium of Zmpste24-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2022.09.061"}], "href": "https://doi.org/10.1016/j.bbrc.2022.09.061"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36201882"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36201882"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Jinlong Suo, Rui Shao, Ruici Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Accelerated aging in articular cartilage by ZMPSTE24 deficiency leads to osteoarthritis with impaired metabolic signaling and epigenetic regulation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-023-05856-3"}], "href": "https://doi.org/10.1038/s41419-023-05856-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37217512"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37217512"}]}]}]}
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| NCBI Gene ID | 100874035 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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PLCH1-AS1 has 10 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 2 datasets.
Click the + buttons to view associations for PLCH1-AS1 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of PLCH1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of PLCH1-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |