PPP2R2B-IT1 Gene

Name PPP2R2B intronic transcript 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts directly examine PPP2R2B‐IT1, the collective literature strongly emphasizes the importance of transcriptional modulators in controlling metabolic and inflammatory pathways that are tightly linked to PPARγ‐dependent gene regulation. Many studies have detailed how PPARγ governs adipocyte differentiation, lipid storage, insulin sensitivity, and inflammatory responses through its interactions with coactivators and corepressors, as well as its post‐translational modification. Given that PPP2R2B‐IT1 is an intronic transcript arising from the PPP2R2B locus—a gene encoding a regulatory subunit of protein phosphatase 2A (PP2A), which itself influences key phosphorylation events in signaling cascades—one can speculate that PPP2R2B‐IT1 may function as a long noncoding RNA modulator that indirectly affects the functional output of PPARγ‐mediated metabolic processes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn many of the cited studies, PPARγ activation affects a host of downstream targets that regulate adipogenesis, inflammation, and lipid homeostasis in tissues such as adipose, liver, and muscle. In parallel, phosphatase activity—as regulated by PP2A complexes—plays a critical role in modulating the phosphorylation status of transcription factors and their coregulators. By virtue of its genomic position within PPP2R2B, the intronic transcript PPP2R2B‐IT1 may be well placed to influence the assembly or activity of PP2A complexes, thereby impacting signaling pathways that converge on PPARγ functionality. Such an action could alter the recruitment of transcriptional coactivators or the dismissal of corepressor complexes, ultimately affecting the transcriptional programs essential for maintaining energy balance and insulin sensitivity."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nCollectively, despite the absence of direct examination of PPP2R2B‐IT1 in these works, the integration of these PPARγ‐focused studies suggests that PPP2R2B‐IT1 may act as a novel regulatory element at the interface of phosphatase signaling and nuclear receptor modulation. This potential function might have significant implications for the regulation of key metabolic processes such as adipogenesis, hepatic lipid accumulation, and insulin sensitivity, and could eventually serve as a target for therapeutic intervention in metabolic syndrome and related diseases."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "21", "end_ref": "27"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Gary Lee, Fabienne Elwood, John McNally, et al. 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NCBI Gene ID 100874361
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Predicted Functions View PPP2R2B-IT1's ARCHS4 Predicted Functions.
Co-expressed Genes View PPP2R2B-IT1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PPP2R2B-IT1's ARCHS4 Predicted Functions.

Functional Associations

PPP2R2B-IT1 has 161 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 3 datasets.

Click the + buttons to view associations for PPP2R2B-IT1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of PPP2R2B-IT1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of PPP2R2B-IT1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of PPP2R2B-IT1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.