PRAMEF18 Gene

Name PRAME family member 18
Description Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of Cul2-RING ubiquitin ligase complex. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe two studies provided focus on the functions of ZMYM2 and its fusion proteins in oncogenesis and embryonic development rather than on PRAMEF18. In one study, ZMYM2 forms a fusion with FGFR1, resulting in a constitutively active kinase that drives stem cell leukemia-lymphoma syndrome. This oncogenic event is accompanied by aberrant Notch1 signaling—a pathway whose inhibition delays tumorigenesis—underscoring the critical contribution of such regulatory networks to T-cell transformation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn a complementary investigation, ZMYM2 was shown to be essential for proper epigenetic regulation during early embryonic development. Loss of ZMYM2 in knockout mouse embryos led to failures in DNA methylation and the inadequate silencing of germline gene promoters and active LINE-1 elements. This deficit resulted in widespread de-repression of normally silenced genomic regions, establishing ZMYM2 as a key mediator of repressive chromatin states via its association with complexes such as PRC1.6 and TRIM28."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nNotably, neither abstract provides functional data on PRAMEF18. Although the experimental frameworks delineate mechanisms of aberrant signal transduction and epigenetic control that are critical to malignant transformation and early development, they do not address the role of PRAMEF18. As such, while the mechanistic insights uncovered regarding ZMYM2-regulated pathways might offer a conceptual basis for exploring the functions of related gene family members like PRAMEF18, no direct evidence for a role of PRAMEF18 in these processes is reported. Future studies will be needed to determine whether PRAMEF18 contributes similarly to oncogenic signaling or epigenetic regulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "MingQiang Ren, John K Cowell "}, {"type": "b", "children": [{"type": "t", "text": "Constitutive Notch pathway activation in murine ZMYM2-FGFR1-induced T-cell lymphomas associated with atypical myeloproliferative disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2010-07-295725"}], "href": "https://doi.org/10.1182/blood-2010-07-295725"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21527531"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21527531"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Adda-Lee Graham-Paquin, Deepak Saini, Jacinthe Sirois, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ZMYM2 is essential for methylation of germline genes and active transposons in embryonic development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nucleic Acids Res (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/nar/gkad540"}], "href": "https://doi.org/10.1093/nar/gkad540"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37395395"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37395395"}]}]}]}
NCBI Gene ID 391003
API
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Predicted Functions View PRAMEF18's ARCHS4 Predicted Functions.
Co-expressed Genes View PRAMEF18's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PRAMEF18's ARCHS4 Predicted Functions.

Functional Associations

PRAMEF18 has 99 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for PRAMEF18 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing PRAMEF18 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with PRAMEF18 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with PRAMEF18 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
GO Biological Process Annotations 2025 biological processes involving PRAMEF18 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2025 cellular components containing PRAMEF18 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by PRAMEF18 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of PRAMEF18 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of PRAMEF18 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of PRAMEF18 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of PRAMEF18 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of PRAMEF18 gene from the RummaGEO Gene Perturbation Signatures dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with PRAMEF18 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.