PRAMEF33 Gene

Name PRAME family member 33
Description Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of Cul2-RING ubiquitin ligase complex. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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Moreover, in the context of innate immune responses, TBC1D15-mediated control of mitochondrial fission counteracts the suppression of the STING DNA-sensing pathway, thereby influencing downstream antiviral signaling."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nTBC1D15 further contributes to cell fate decisions by perturbing the Numb–p53 complex. Its amino-terminal domain dislodges p53 from Numb, leading to p53 degradation and thereby enhancing stem cell self-renewal and pluripotency—a function that supports oncogenic processes. Notably, cellular levels of TBC1D15 are finely tuned by nutrient status through autophagy‐mediated degradation, underscoring its role as a metabolic sensor linking cell survival, differentiation, and tumor expansion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn contrast, a separate study focused on Spata17—although not directly linked to TBC1D15—reveals that the Spata17 protein is predominantly expressed in spermatids and can trigger apoptosis in male germ cell lines, suggesting its involvement in spermatogenesis and the regulation of germ cell fate."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xiang-Ming Zhang, Bong Walsh, Christina A Mitchell, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TBC domain family, member 15 is a novel mammalian Rab GTPase-activating protein with substrate preference for Rab7."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2005.07.070"}], "href": "https://doi.org/10.1016/j.bbrc.2005.07.070"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16055087"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16055087"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Eigen R Peralta, Brent C Martin, Aimee L Edinger "}, {"type": "b", "children": [{"type": "t", "text": "Differential effects of TBC1D15 and mammalian Vps39 on Rab7 activation state, lysosomal morphology, and growth factor dependence."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M110.111633"}], "href": "https://doi.org/10.1074/jbc.M110.111633"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20363736"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20363736"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Dohyeong Kwon, Eunbyeol Park, Suk-Jo Kang "}, {"type": "b", "children": [{"type": "t", "text": "Stimulator of IFN genes-mediated DNA-sensing pathway is suppressed by NLRP3 agonists and regulated by mitofusin 1 and TBC1D15, mitochondrial dynamics mediators."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.201700328R"}], "href": "https://doi.org/10.1096/fj.201700328R"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28729291"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28729291"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Wenjun Yu, Shiqun Sun, Haixia Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "TBC1D15/RAB7-regulated mitochondria-lysosome interaction confers cardioprotection against acute myocardial infarction-induced cardiac injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Theranostics (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/thno.46883"}], "href": "https://doi.org/10.7150/thno.46883"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33042281"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33042281"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Douglas E Feldman, Chialin Chen, Vasu Punj, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The TBC1D15 oncoprotein controls stem cell self-renewal through destabilization of the Numb-p53 complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0057312"}], "href": "https://doi.org/10.1371/journal.pone.0057312"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23468968"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23468968"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Yun Deng, Liang-Sha Hu, Guang-Xiu Lu "}, {"type": "b", "children": [{"type": "t", "text": "Expression and identification of a novel apoptosis gene Spata17 (MSRG-11) in mouse spermatogenic cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Acta Biochim Biophys Sin (Shanghai) (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1745-7270.2006.00125.x"}], "href": "https://doi.org/10.1111/j.1745-7270.2006.00125.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16395525"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16395525"}]}]}]}
NCBI Gene ID 645382
API
Download Associations
Predicted Functions View PRAMEF33's ARCHS4 Predicted Functions.
Co-expressed Genes View PRAMEF33's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PRAMEF33's ARCHS4 Predicted Functions.

Functional Associations

PRAMEF33 has 107 functional associations with biological entities spanning 3 categories (functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for PRAMEF33 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of PRAMEF33 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing PRAMEF33 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
GO Biological Process Annotations 2025 biological processes involving PRAMEF33 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2025 cellular components containing PRAMEF33 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by PRAMEF33 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of PRAMEF33 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of PRAMEF33 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of PRAMEF33 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of PRAMEF33 gene from the RummaGEO Gene Perturbation Signatures dataset.