PRAMEF7 Gene

HGNC Family PRAME family (PRAMEF)
Name PRAME family member 7
Description Predicted to enable ubiquitin-like ligase-substrate adaptor activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Predicted to be part of Cul2-RING ubiquitin ligase complex. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts directly mention PRAMEF7, they collectively describe key functions of plakophilin‑2 (PKP2), a desmosomal protein essential for cardiac structure and function. In embryonic development and mature hearts, PKP2 participates in assembling intercellular junctions, thereby ensuring proper cell–cell adhesion and maintaining the mechanical integrity of cardiomyocytes. Disruption of PKP2, as demonstrated in mouse knockout models, leads to defects in heart morphogenesis, disarray of the cytoskeleton, and breakdown of the intercalated discs that normally secure the myocardium’s architecture."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its structural role, PKP2 is crucial for modulating the electrophysiological properties of cardiac cells. Several studies showed that reduced PKP2 expression—whether by gene mutation, knockdown, or haploinsufficiency—leads to sodium current (Iₙₐ) deficits, altered intracellular calcium handling, and impaired electrical synchronization. These electrical alterations are linked to life‐threatening arrhythmias, including Brugada syndrome phenotypes, even in the absence of overt structural cardiomyopathy."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "3", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its roles in cellular adhesion and electrical conduction, loss or mutation of PKP2 has been implicated in broader changes in intracellular signaling and gene expression. Deficiency of PKP2 leads to aberrant activation of fibrotic (e.g. TGF‑β/p38 MAPK) pathways, remodeling of intercalated disc components, and dysregulation of focal adhesion and actin cytoskeletal genes. These molecular alterations contribute to the development of arrhythmogenic cardiomyopathy and exacerbate adverse responses during stressors such as endurance exercise, catecholaminergic stimulation, or even substance abuse (as observed in altered prefrontal cortex gene expression profiles). These transcriptomic changes highlight a multifaceted contribution of PKP2 to both the mechanical integrity of cardiac tissue and the regulation of electrical homeostasis under physiological and pathological conditions."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "13"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Katja S Grossmann, Christine Grund, Joerg Huelsken, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Requirement of plakophilin 2 for heart morphogenesis and cardiac junction formation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.200402096"}], "href": "https://doi.org/10.1083/jcb.200402096"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15479741"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15479741"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Steven Goossens, Barbara Janssens, Stefan Bonné, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A unique and specific interaction between alphaT-catenin and plakophilin-2 in the area composita, the mixed-type junctional structure of cardiac intercalated discs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Sci (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/jcs.004713"}], "href": "https://doi.org/10.1242/jcs.004713"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17535849"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17535849"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Marina Cerrone, Maartje Noorman, Xianming Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sodium current deficit and arrhythmogenesis in a murine model of plakophilin-2 haploinsufficiency."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cardiovasc Res (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/cvr/cvs218"}], "href": "https://doi.org/10.1093/cvr/cvs218"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22764151"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22764151"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Marina Cerrone, Xianming Lin, Mingliang Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Missense mutations in plakophilin-2 cause sodium current deficit and associate with a Brugada syndrome phenotype."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circulation (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCULATIONAHA.113.003077"}], "href": "https://doi.org/10.1161/CIRCULATIONAHA.113.003077"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24352520"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24352520"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Marina Cerrone, Jerome Montnach, Xianming Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Plakophilin-2 is required for transcription of genes that control calcium cycling and cardiac rhythm."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-017-00127-0"}], "href": "https://doi.org/10.1038/s41467-017-00127-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28740174"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28740174"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Adi D Dubash, Chen Y Kam, Brian A Aguado, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Plakophilin-2 loss promotes TGF-β1/p38 MAPK-dependent fibrotic gene expression in cardiomyocytes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.201507018"}], "href": "https://doi.org/10.1083/jcb.201507018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26858265"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26858265"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Priyatansh Gurha, Xiaofan Chen, Raffaella Lombardi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Knockdown of Plakophilin 2 Downregulates miR-184 Through CpG Hypermethylation and Suppression of the E2F1 Pathway and Leads to Enhanced Adipogenesis In Vitro."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circ Res (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCRESAHA.116.308422"}], "href": "https://doi.org/10.1161/CIRCRESAHA.116.308422"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27470638"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27470638"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Javier Moncayo-Arlandi, Eduard Guasch, Maria Sanz-de la Garza, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Molecular disturbance underlies to arrhythmogenic cardiomyopathy induced by transgene content, age and exercise in a truncated PKP2 mouse model."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddw213"}], "href": "https://doi.org/10.1093/hmg/ddw213"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27412010"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27412010"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Carolina de Paiva Lima, Daniel Almeida da Silva E Silva, Samara Damasceno, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of control over the ethanol consumption: differential transcriptional regulation in prefrontal cortex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurogenet (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/01677063.2017.1349121"}], "href": "https://doi.org/10.1080/01677063.2017.1349121"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28714806"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28714806"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Joon-Chul Kim, Marta Pérez-Hernández, Francisco J Alvarado, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Disruption of Ca"}, {"type": "a", "children": [{"type": "t", "text": "sup"}], "href": "sup"}, {"type": "t", "text": "2+"}, {"type": "a", "children": [{"type": "t", "text": "/sup"}], "href": "/sup"}, {"type": "a", "children": [{"type": "t", "text": "sub"}], "href": "sub"}, {"type": "t", "text": "i"}, {"type": "a", "children": [{"type": "t", "text": "/sub"}], "href": "/sub"}, {"type": "t", "text": " Homeostasis and Connexin 43 Hemichannel Function in the Right Ventricle Precedes Overt Arrhythmogenic Cardiomyopathy in Plakophilin-2-Deficient Mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circulation (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCULATIONAHA.119.039710"}], "href": "https://doi.org/10.1161/CIRCULATIONAHA.119.039710"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31315456"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31315456"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Luca Puzzi, Daniele Borin, Priyatansh Gurha, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Knock Down of Plakophillin 2 Dysregulates Adhesion Pathway through Upregulation of miR200b and Alters the Mechanical Properties in Cardiac Cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cells (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/cells8121639"}], "href": "https://doi.org/10.3390/cells8121639"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31847412"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31847412"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Marina Cerrone, Grecia M Marrón-Liñares, Chantal J M van Opbergen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role of plakophilin-2 expression on exercise-related progression of arrhythmogenic right ventricular cardiomyopathy: a translational study."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Eur Heart J (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/eurheartj/ehab772"}], "href": "https://doi.org/10.1093/eurheartj/ehab772"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34932122"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34932122"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Chantal J M van Opbergen, Navratan Bagwan, Svetlana R Maurya, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Exercise Causes Arrhythmogenic Remodeling of Intracellular Calcium Dynamics in Plakophilin-2-Deficient Hearts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circulation (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCULATIONAHA.121.057757"}], "href": "https://doi.org/10.1161/CIRCULATIONAHA.121.057757"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35491884"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35491884"}]}]}]}
Proteins PRAM7_HUMAN
NCBI Gene ID 441871
API
Download Associations
Predicted Functions View PRAMEF7's ARCHS4 Predicted Functions.
Co-expressed Genes View PRAMEF7's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PRAMEF7's ARCHS4 Predicted Functions.

Functional Associations

PRAMEF7 has 500 functional associations with biological entities spanning 6 categories (molecular profile, functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 25 datasets.

Click the + buttons to view associations for PRAMEF7 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PRAMEF7 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of PRAMEF7 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
ChEA Transcription Factor Targets 2022 transcription factors binding the promoter of PRAMEF7 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing PRAMEF7 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with PRAMEF7 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
COSMIC Cell Line Gene Mutation Profiles cell lines with PRAMEF7 gene mutations from the COSMIC Cell Line Gene Mutation Profiles dataset.
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 diseases co-occuring with PRAMEF7 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of PRAMEF7 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of PRAMEF7 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of PRAMEF7 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of PRAMEF7 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GO Biological Process Annotations 2025 biological processes involving PRAMEF7 gene from the curated GO Biological Process Annotations2025 dataset.
GO Cellular Component Annotations 2025 cellular components containing PRAMEF7 protein from the curated GO Cellular Component Annotations 2025 dataset.
GO Molecular Function Annotations 2025 molecular functions performed by PRAMEF7 gene from the curated GO Molecular Function Annotations 2025 dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of PRAMEF7 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles cell lines with high or low expression of PRAMEF7 gene relative to other cell lines from the Heiser et al., PNAS, 2011 Cell Line Gene Expression Profiles dataset.
HPA Tissue Protein Expression Profiles tissues with high or low expression of PRAMEF7 protein relative to other tissues from the HPA Tissue Protein Expression Profiles dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of PRAMEF7 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of PRAMEF7 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of PRAMEF7 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of PRAMEF7 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
LOCATE Predicted Protein Localization Annotations cellular components predicted to contain PRAMEF7 protein from the LOCATE Predicted Protein Localization Annotations dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of PRAMEF7 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of PRAMEF7 gene from the RummaGEO Gene Perturbation Signatures dataset.
Sanger Dependency Map Cancer Cell Line Proteomics cell lines associated with PRAMEF7 protein from the Sanger Dependency Map Cancer Cell Line Proteomics dataset.