| Name | proline rich 20D |
| Description | This gene is one of five identical loci in a cluster on chromosome 13q21.1. The predicted protein is proline-rich and contains several dopamine D4 receptor signatures and PRINTS domains. [provided by RefSeq, Oct 2008] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe neutral amino acid transporter SLC6A19 (B₀AT1) is a sodium‐dependent carrier predominantly expressed in the luminal (brush‐border) membranes of renal proximal tubule and intestinal epithelial cells. Its identification as the causative gene in Hartnup disorder highlighted its critical role in mediating the uptake of neutral amino acids, while electrophysiological and tracer studies in expression systems have demonstrated that SLC6A19 transports a broad spectrum of neutral amino acids via a 1:1 sodium co‐transport mechanism, with a preference for large neutral amino acids and complex kinetic properties modulated by membrane potential. Its proper localization in epithelia is essential for efficient absorption and re‐absorption of dietary and filtered amino acids."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its basic transport function, SLC6A19 activity is tightly regulated by a network of accessory proteins and kinases. Its expression and catalytic function at the cell surface are dependent on interactions with proteins such as collectrin and ACE2, which facilitate proper membrane trafficking and stabilization. In addition, serum‐ and glucocorticoid‐inducible kinases (SGK1–3) upregulate SLC6A19 activity by enhancing its plasma membrane insertion and retarding its internalization. Further modulation is achieved via interactions with peptidases like aminopeptidase N that can increase local substrate concentrations and with syntaxin family members that may compete with collectrin for binding, thereby influencing the efficiency of amino acid uptake."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "7", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nPhysiological studies in animal models have further established the significance of SLC6A19 in whole‐body amino acid homeostasis and metabolic regulation. Mice lacking functional SLC6A19 exhibit generalized neutral aminoaciduria, reduced body weight, blunted insulin secretion, and aberrant activation of nutrient stress signaling pathways, underscoring its vital role in maintaining nutrient balance. In addition, impaired tryptophan absorption via SLC6A19 has been linked to disturbances in NAD metabolism during pregnancy, leading to embryonic growth retardation and specific congenital malformations. Finally, during preimplantation development, SLC6A19 contributes to the uptake of amino acids such as L‐proline, with its deficiency resulting in compromised embryo development."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Robert Kleta, Elisa Romeo, Zorica Ristic, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Steady-state kinetic characterization of the mouse B(0)AT1 sodium-dependent neutral amino acid transporter."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pflugers Arch (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s00424-005-1455-x"}], "href": "https://doi.org/10.1007/s00424-005-1455-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16133263"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16133263"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Elisa Romeo, Mital H Dave, Desa Bacic, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Luminal kidney and intestine SLC6 amino acid transporters of B0AT-cluster and their tissue distribution in Mus musculus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Renal Physiol (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajprenal.00286.2005"}], "href": "https://doi.org/10.1152/ajprenal.00286.2005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16174864"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16174864"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Simone M R Camargo, Dustin Singer, Victoria Makrides, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Tissue-specific amino acid transporter partners ACE2 and collectrin differentially interact with hartnup mutations."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Gastroenterology (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1053/j.gastro.2008.10.055"}], "href": "https://doi.org/10.1053/j.gastro.2008.10.055"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19185582"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19185582"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Angelika Bröer, Torsten Juelich, Jessica M Vanslambrouck, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Impaired nutrient signaling and body weight control in a Na+ neutral amino acid cotransporter (Slc6a19)-deficient mouse."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M111.241323"}], "href": "https://doi.org/10.1074/jbc.M111.241323"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21636576"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21636576"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Christoph Böhmer, Mentor Sopjani, Fabian Klaus, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The serum and glucocorticoid inducible kinases SGK1-3 stimulate the neutral amino acid transporter SLC6A19."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Physiol Biochem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1159/000315092"}], "href": "https://doi.org/10.1159/000315092"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20511718"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20511718"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "G Einecke, D Kayser, J M Vanslambrouck, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of solute carriers in T cell-mediated rejection in mouse and human kidneys: an active epithelial injury-repair response."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Transplant (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1600-6143.2010.03263.x"}], "href": "https://doi.org/10.1111/j.1600-6143.2010.03263.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20883558"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20883558"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Stephen J Fairweather, Angelika Bröer, Megan L O'Mara, et al. 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| Synonyms | PRR20C |
| Proteins | PR20D_HUMAN |
| NCBI Gene ID | 729246 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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PRR20D has 291 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.
Click the + buttons to view associations for PRR20D from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of PRR20D gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of PRR20D gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at PRR20D gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of PRR20D gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of PRR20D gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of PRR20D gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of PRR20D gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of PRR20D gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of PRR20D gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| TargetScan Predicted Nonconserved microRNA Targets | microRNAs regulating expression of PRR20D gene predicted using nonconserved miRNA seed sequences from the TargetScan Predicted Nonconserved microRNA Targets dataset. | |