PRRT3-AS1 Gene

Name PRRT3 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent studies have demonstrated that lncRNA PRRT3‑AS1 plays a pivotal role in the regulation of cancer cell behavior. In prostate cancer, for example, silencing PRRT3‑AS1 was found to upregulate apoptosis and autophagy while downregulating proliferation, migration, and invasion via modulation of the peroxisome proliferator‑activated receptor γ (PPARγ)‑mediated mechanistic target of rapamycin (mTOR) signalling pathway. This finding suggests that targeting PRRT3‑AS1 could offer a promising therapeutic avenue for managing prostate cancer."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the context of skin cutaneous melanoma (SKCM), integrated analyses of single‑cell and bulk RNA sequencing data have identified PRRT3‑AS1 among a panel of prognostic long non‑coding RNAs. Although the underlying mechanisms in melanoma remain to be fully elucidated, its identification as a potential biomarker underlines the importance of PRRT3‑AS1 in the diagnosis and prognosis of this aggressive cancer."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurthermore, in non‑small cell lung cancer (NSCLC), elevated levels of PRRT3‑AS1 have been associated with increased cellular proliferation, colony formation, invasion, and migration. Mechanistic investigations revealed that PRRT3‑AS1 functions as a competing endogenous RNA by sequestering microRNA‑507, thereby upregulating the expression of HOXB5—a pathway that significantly contributes to the malignancy and progression of NSCLC. These insights provide a strong rationale for considering the PRRT3‑AS1/miR‑507/HOXB5 axis as a potential diagnostic, prognostic, and therapeutic target in lung cancer."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Li Fan, Hai Li, Weihua Wang "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA PRRT3-AS1 silencing inhibits prostate cancer cell proliferation and promotes apoptosis and autophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Physiol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1113/EP088011"}], "href": "https://doi.org/10.1113/EP088011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32086850"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32086850"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Wancong Zhang, Xuqi Xie, Zijian Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The integration of single-cell sequencing, TCGA, and GEO data analysis revealed that PRRT3-AS1 is a biomarker and therapeutic target of SKCM."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Front Immunol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3389/fimmu.2022.919145"}], "href": "https://doi.org/10.3389/fimmu.2022.919145"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36211371"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36211371"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Rui Zhou, Jianyang Xu, Lingwei Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA PRRT3-AS1 exerts oncogenic effects on nonsmall cell lung cancer by targeting microRNA-507/homeobox B5 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncol Res (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.32604/or.2022.026236"}], "href": "https://doi.org/10.32604/or.2022.026236"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37304647"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37304647"}]}]}]}
NCBI Gene ID 100874032
API
Download Associations
Predicted Functions View PRRT3-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View PRRT3-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PRRT3-AS1's ARCHS4 Predicted Functions.

Functional Associations

PRRT3-AS1 has 724 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, chemical, cell line, cell type or tissue) extracted from 9 datasets.

Click the + buttons to view associations for PRRT3-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of PRRT3-AS1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of PRRT3-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of PRRT3-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of PRRT3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of PRRT3-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of PRRT3-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PRRT3-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of PRRT3-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles cell types and tissues with high or low DNA methylation of PRRT3-AS1 gene relative to other cell types and tissues from the Roadmap Epigenomics Cell and Tissue DNA Methylation Profiles dataset.