PVALEF Gene

Name parvalbumin like EF-hand containing
Description Predicted to enable calcium ion binding activity. Predicted to be involved in skeletal muscle contraction. Predicted to be part of troponin complex. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nPCP2, also known as L7, is expressed exclusively in cerebellar Purkinje cells and retinal bipolar neurons and has been harnessed as a cell type–specific promoter to drive Cre recombinase expression. This precise genetic targeting has enabled researchers to achieve highly specific genetic manipulation in these neurons, facilitating detailed studies on cerebellar circuitry and retinal function without ectopic activity."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAt the molecular level, PCP2 serves as a modulator of G protein–coupled receptor signaling by interacting specifically with Galpha(i) and Galpha(o) subunits via its GoLoco domains. Studies have revealed that the gene produces multiple splice variants—some differing in the number of GoLoco domains and binding efficacy—which suggests that PCP2 fine‐tunes receptor signaling through mechanisms that may include guanine nucleotide dissociation inhibition as well as guanine nucleotide exchange. This molecular diversity underscores its role in the precise regulation of signal transduction in both developmental and mature neuronal contexts."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFunctionally, PCP2 influences neuronal differentiation and synaptic plasticity. Its expression has been shown to stimulate neurite outgrowth and enhance nerve growth factor–mediated signaling via the Ras and p38 MAPK pathways, as demonstrated in models of neuronal differentiation. Moreover, loss or alteration of PCP2 function in cerebellar Purkinje cells leads to modifications in electrophysiological properties—such as changes in the complex spike waveform—and results in enhanced sensorimotor performance, improved motor learning, and altered temporal tuning in tasks related to both motor function and emotional processing. These findings indicate that PCP2 acts as a sensorimotor damper, modulating the amplitude and timing of neuronal responses in a context- and even sex-dependent manner."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "11"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the retina, distinct PCP2 splice variants are critical for modulating light response kinetics. Specifically, PCP2 facilitates the closure of cation channels in ON bipolar cells, thereby accelerating the rise and decay phases of the light-evoked response. Additionally, altered expression and the presence of multiple PCP2 isoforms have been noted in neurodegenerative conditions such as Niemann–Pick disease type C1, suggesting that PCP2’s regulatory roles extend into disease-related pathophysiology."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xin-Mei Zhang, Alam Hoi-Lam Ng, Julian A Tanner, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Highly restricted expression of Cre recombinase in cerebellar Purkinje cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genesis (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/gene.20062"}], "href": "https://doi.org/10.1002/gene.20062"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15354293"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15354293"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hiromitsu Saito, Hideki Tsumura, Seiichi Otake, et al. "}, {"type": "b", "children": [{"type": "t", "text": "L7/Pcp-2-specific expression of Cre recombinase using knock-in approach."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2005.04.043"}], "href": "https://doi.org/10.1016/j.bbrc.2005.04.043"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15883005"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15883005"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Elena Ivanova, Patrick Lee, Zhuo-Hua Pan "}, {"type": "b", "children": [{"type": "t", "text": "Characterization of multiple bistratified retinal ganglion cells in a purkinje cell protein 2-Cre transgenic mouse line."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Comp Neurol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/cne.23279"}], "href": "https://doi.org/10.1002/cne.23279"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23224947"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23224947"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xulun Zhang, Hailing Zhang, John Oberdick "}, {"type": "b", "children": [{"type": "t", "text": "Conservation of the developmentally regulated dendritic localization of a Purkinje cell-specific mRNA that encodes a G-protein modulator: comparison of rodent and human Pcp2(L7) gene structure and expression."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res Mol Brain Res (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s0169-328x(02)00379-0"}], "href": "https://doi.org/10.1016/s0169-328x(02"}, {"type": "t", "text": "00379-0) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12399102"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12399102"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Kacy J Redd, John Oberdick, John McCoy, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Association and colocalization of G protein alpha subunits and Purkinje cell protein 2 (Pcp2) in mammalian cerebellum."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci Res (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jnr.10460"}], "href": "https://doi.org/10.1002/jnr.10460"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12424730"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12424730"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Jaroslaw J Barski, Brad M Denker, Jiazhen Guan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Developmental upregulation of an alternative form of pcp2 with reduced GDI activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cerebellum (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12311-013-0529-0"}], "href": "https://doi.org/10.1007/s12311-013-0529-0"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24092530"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24092530"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "M A Przybyła, M M Nowacka-Chmielewska, J J Barski "}, {"type": "b", "children": [{"type": "t", "text": "Expression of a novel splicing variant of Pcp2 in closely related laboratory rodents."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genet Mol Res (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4238/gmr.15038228"}], "href": "https://doi.org/10.4238/gmr.15038228"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27525924"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27525924"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Jiazhen Guan, Yuan Luo, Bradley M Denker "}, {"type": "b", "children": [{"type": "t", "text": "Purkinje cell protein-2 (Pcp2) stimulates differentiation in PC12 cells by Gbetagamma-mediated activation of Ras and p38 MAPK."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem J (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BJ20042102"}], "href": "https://doi.org/10.1042/BJ20042102"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15948714"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15948714"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Negah Rahmati, Cullen B Owens, Laurens W J Bosman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cerebellar potentiation and learning a whisker-based object localization task with a time response window."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.2966-13.2014"}], "href": "https://doi.org/10.1523/JNEUROSCI.2966-13.2014"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24478374"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24478374"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Emilia Iscru, Yelda Serinagaoglu, Karl Schilling, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sensorimotor enhancement in mouse mutants lacking the Purkinje cell-specific Gi/o modulator, Pcp2(L7)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Neurosci (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.mcn.2008.09.002"}], "href": "https://doi.org/10.1016/j.mcn.2008.09.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18930827"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18930827"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "James C Walton, Karl Schilling, Randy J Nelson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sex-dependent behavioral functions of the Purkinje cell-specific Gαi/o binding protein, Pcp2(L7)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cerebellum (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s12311-012-0368-4"}], "href": "https://doi.org/10.1007/s12311-012-0368-4"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22528962"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22528962"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Ying Xu, Pyroja Sulaiman, Rod M Feddersen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Retinal ON bipolar cells express a new PCP2 splice variant that accelerates the light response."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.0812-08.2008"}], "href": "https://doi.org/10.1523/JNEUROSCI.0812-08.2008"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18768681"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18768681"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Melissa R Pergande, Thu T A Nguyen, Carol Haney-Ball, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Quantitative, Label-Free Proteomics in the Symptomatic Niemann-Pick, Type C1 Mouse Model Using Standard Flow Liquid Chromatography and Thermal Focusing Electrospray Ionization."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proteomics (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/pmic.201800432"}], "href": "https://doi.org/10.1002/pmic.201800432"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30888112"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30888112"}]}]}]}
NCBI Gene ID 388428
API
Download Associations
Predicted Functions View PVALEF's ARCHS4 Predicted Functions.
Co-expressed Genes View PVALEF's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View PVALEF's ARCHS4 Predicted Functions.

Functional Associations

PVALEF has 670 functional associations with biological entities spanning 5 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 12 datasets.

Click the + buttons to view associations for PVALEF from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles tissue samples with high or low expression of PVALEF gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of PVALEF gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 cellular components containing PVALEF protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset.
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 cellular components co-occuring with PVALEF protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset.
DISEASES Experimental Gene-Disease Association Evidence Scores 2025 diseases associated with PVALEF gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset.
GO Biological Process Annotations 2025 biological processes involving PVALEF gene from the curated GO Biological Process Annotations2025 dataset.
GTEx Tissue Gene Expression Profiles 2023 tissues with high or low expression of PVALEF gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of PVALEF gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of PVALEF gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of PVALEF gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of PVALEF gene from the RummaGEO Gene Perturbation Signatures dataset.
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 tissues co-occuring with PVALEF protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset.