RBM26-AS1 Gene

Name RBM26 antisense RNA 1
Summary
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In these studies, DCX is shown to be critical for proper nucleokinesis and cytoskeletal organization, as its microtubule‐binding properties and regulated phosphorylation (by kinases such as Cdk5, JNK, and others) enable the dynamic interaction with the microtubule network that underpins migration and process outgrowth."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional work detailed in these abstracts demonstrates that DCX interacts with a spectrum of cytoskeletal and regulatory proteins—including DCLK family members, neurabin II/spinophilin, and components of the vesicular transport machinery—to coordinate aspects of polarity, dendritic development, and even axonal transport. Disruptions in DCX function or its post‐translational regulation are linked to severe malformations and neurological conditions such as lissencephaly, double cortex syndrome, and epilepsy. These studies also underscore that the spatially and temporally regulated phosphorylation of DCX markedly influences its binding affinity to microtubules, thereby modulating cellular behaviors from growth cone dynamics to nuclear translocation and process stabilization during neural development."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "7", "end_ref": "14"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIntriguingly, while these richly detailed studies on DCX elucidate the molecular underpinnings of neuronal migration and circuit integration, none of the abstracts address or implicate RBM26‐AS1. Hence, within this body of work there is no functional evidence linking RBM26‐AS1 to neurogenesis, cytoskeletal regulation, or neuronal migration. In light of the extensive data on DCX and its regulatory network, the role of RBM26‐AS1—if any—in similar physiological or pathological processes remains to be explored. Future investigations will be needed to determine whether RBM26‐AS1 might interact with elements of the DCX pathway or serve distinct regulatory roles in neuronal development."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}, {"type": "fg_fs", "start_ref": "15", "end_ref": "20"}, {"type": "fg_f", "ref": "13"}, {"type": "fg_f", "ref": "12"}, {"type": "fg_f", "ref": "16"}, {"type": "fg_fs", "start_ref": "21", "end_ref": "25"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Joseph C Corbo, Thomas A Deuel, Jeffrey M Long, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Both doublecortin and doublecortin-like kinase play a role in cortical interneuron migration."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.4530-06.2007"}], "href": "https://doi.org/10.1523/JNEUROSCI.4530-06.2007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17409252"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17409252"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Friederike Klempin, Golo Kronenberg, Giselle Cheung, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Regulation of neuronal morphogenesis by 14-3-3epsilon (Ywhae) via the microtubule binding protein, doublecortin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddw270"}], "href": "https://doi.org/10.1093/hmg/ddw270"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28173130"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28173130"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Ann-Christin Hau, Britta Moyo Grebbin, Zsuzsa Agoston, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MEIS homeodomain proteins facilitate PARP1/ARTD1-mediated eviction of histone H1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.201701154"}], "href": "https://doi.org/10.1083/jcb.201701154"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28739678"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28739678"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Phillip D Rivera, Richa Hanamsagar, Matthew J Kan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Removal of microglial-specific MyD88 signaling alters dentate gyrus doublecortin and enhances opioid addiction-like behaviors."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Behav Immun (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbi.2018.11.010"}], "href": "https://doi.org/10.1016/j.bbi.2018.11.010"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30447281"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30447281"}]}]}]}
NCBI Gene ID 100505538
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Download Associations
Predicted Functions View RBM26-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View RBM26-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View RBM26-AS1's ARCHS4 Predicted Functions.

Functional Associations

RBM26-AS1 has 1,749 functional associations with biological entities spanning 6 categories (molecular profile, organism, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 21 datasets.

Click the + buttons to view associations for RBM26-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of RBM26-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CCLE Cell Line Gene Expression Profiles cell lines with high or low expression of RBM26-AS1 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with RBM26-AS1 gene from the CellMarker Gene-Cell Type Associations dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of RBM26-AS1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at RBM26-AS1 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of RBM26-AS1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of RBM26-AS1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Diseases disease perturbations changing expression of RBM26-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Diseases dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of RBM26-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of RBM26-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of RBM26-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of RBM26-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of RBM26-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of RBM26-AS1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of RBM26-AS1 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
GWASdb SNP-Disease Associations diseases associated with RBM26-AS1 gene in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.
GWASdb SNP-Phenotype Associations phenotypes associated with RBM26-AS1 gene in GWAS datasets from the GWASdb SNP-Phenotype Associations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of RBM26-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of RBM26-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of RBM26-AS1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at RBM26-AS1 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.