| Name | RNA, 5.8S ribosomal pseudogene 6 |
| Summary |
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This molecular function is critical in tissues where specialized junctions must ensure both structural integrity and dynamic remodeling—for instance, during spermatid development where loss of proper RNA5‑8SP6/nectin‑3 function leads to disrupted Sertoli–spermatid junctions, aberrant sperm morphogenesis, and consequent male infertility."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the central nervous system, RNA5‑8SP6’s product is expressed in discrete neuronal populations where it helps to direct the formation and stabilization of synaptic contacts. Its heterophilic interactions—which include partnering with nectin‑1 on Cajal–Retzius cells and other sites—regulate neurite adhesion, influence neuronal migration, and modulate synaptic plasticity. Experimental manipulations that reduce RNA5‑8SP6 expression in the hippocampus result in deficits in dendritic spine density and lead to impairments in functions such as spatial and temporal memory. These findings link the molecule not only to normal developmental processes but also to stress‐induced cognitive alterations."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMoreover, RNA5‑8SP6 plays roles beyond the nervous and reproductive systems. In various epithelial contexts—including the auditory epithelium, renal tubules, and developing teeth—its product contributes to the precise patterning of cells by regulating the localization and activity of other adhesion proteins (for example, E‑cadherin and integrins). It is also implicated in processes such as cell migration, epithelial polarity, and the recruitment of tight and adherens junction components during morphogenesis. Dysregulation of RNA5‑8SP6 function or expression has been associated with abnormal cell adhesion, altered junctional protein interactions, and even stress‐induced impairments in both neural and testicular tissue remodeling."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "24"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Kumi Ozaki-Kuroda, Hiroyuki Nakanishi, Hiroshi Ohta, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Role of cell adhesion molecule nectin-3 in spermatid development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Cells (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1365-2443.2006.01006.x"}], "href": "https://doi.org/10.1111/j.1365-2443.2006.01006.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16923130"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16923130"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Toshiyuki Yoshida, Jun Miyoshi, Yoshimi Takai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cooperation of nectin-1 and nectin-3 is required for normal ameloblast function and crown shape development in mouse teeth."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dev Dyn (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/dvdy.22395"}], "href": "https://doi.org/10.1002/dvdy.22395"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21038445"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21038445"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Terunobu Fukuda, Kanoko Kominami, Shujie Wang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Nectin proteins are expressed at early stages of nephrogenesis and play a role in renal epithelial cell morphogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Renal Physiol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajprenal.90328.2008"}], "href": "https://doi.org/10.1152/ajprenal.90328.2008"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19116242"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19116242"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Hong-Li Wang, Ji-Tao Li, Han Wang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "s-Afadin binds more preferentially to the cell adhesion molecules nectins than l-afadin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Cells (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/gtc.12185"}], "href": "https://doi.org/10.1111/gtc.12185"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25263091"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25263091"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Yoshiro Toyama, Fumie Suzuki-Toyota, Mamiko Maekawa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Disruption of ectoplasmic specializations between Sertoli cells and maturing spermatids by anti-nectin-2 and anti-nectin-3 antibodies."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Asian J Androl (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1745-7262.2008.00357.x"}], "href": "https://doi.org/10.1111/j.1745-7262.2008.00357.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18097512"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18097512"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "T Li, J Yao, Q Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Chronic stress impairs male spermatogenesis function and Nectin-3 protein expression in the testis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Physiol Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.33549/physiolres.934287"}], "href": "https://doi.org/10.33549/physiolres.934287"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32324042"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32324042"}]}]}]}
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| Synonyms | RN5-8S6 |
| NCBI Gene ID | 100873336 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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RNA5-8SP6 has 3 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 1 datasets.
Click the + buttons to view associations for RNA5-8SP6 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of RNA5-8SP6 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |