RNA5S5 Gene

HGNC Family Non-coding RNAs
Name RNA, 5S ribosomal 5
Description Predicted to be a structural constituent of ribosome. Predicted to be located in ribosome. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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Its activity promotes histone modifications—such as H2A ubiquitination—that silence developmental and differentiation‐associated genes (including Hox genes) and thereby help to frame cell identity during embryogenesis and adult tissue renewal."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nDysregulation of BMI1 is also implicated in tumorigenesis. Overexpression of BMI1 underlies the maintenance and enhanced proliferative potential of cancer stem and progenitor cells in hematologic malignancies, medulloblastoma, and gliomas, among others, by counteracting anti‐proliferative signals. Moreover, BMI1 acts as an epigenetic barrier during direct reprogramming of somatic cells, as its reduction can facilitate fate conversion through remodeling of chromatin marks (thereby increasing active H3K4me3 and reducing repressive H2AK119ub) and altering metabolic and redox states."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "15"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nCollectively, these studies underscore the multifaceted roles of BMI1 in developmental biology and disease. By orchestrating epigenetic repression, promoting stem cell self‐renewal and proliferation, and modulating cellular metabolism, BMI1 emerges not only as a pivotal determinant of normal tissue maintenance but also as a central player in cancer progression and a potential therapeutic target for regenerative medicine and oncology interventions."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "16"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Julie Lessard, Guy Sauvageau "}, {"type": "b", "children": [{"type": "t", "text": "Bmi-1 determines the proliferative capacity of normal and leukaemic stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature01572"}], "href": "https://doi.org/10.1038/nature01572"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12714970"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12714970"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "In-kyung Park, Dalong Qian, Mark Kiel, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bmi-1 is required for maintenance of adult self-renewing haematopoietic stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature01587"}], "href": "https://doi.org/10.1038/nature01587"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12714971"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12714971"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Anna V Molofsky, Ricardo Pardal, Toshihide Iwashita, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bmi-1 dependence distinguishes neural stem cell self-renewal from progenitor proliferation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature02060"}], "href": "https://doi.org/10.1038/nature02060"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14574365"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14574365"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Atsushi Iwama, Hideyuki Oguro, Masamitsu Negishi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Enhanced self-renewal of hematopoietic stem cells mediated by the polycomb gene product Bmi-1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunity (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.immuni.2004.11.004"}], "href": "https://doi.org/10.1016/j.immuni.2004.11.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15589172"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15589172"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Hideyuki Oguro, Atsushi Iwama, Yohei Morita, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential impact of Ink4a and Arf on hematopoietic stem cells and their bone marrow microenvironment in Bmi1-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Exp Med (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1084/jem.20052477"}], "href": "https://doi.org/10.1084/jem.20052477"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16954369"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16954369"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Adrian P Bracken, Daniela Kleine-Kohlbrecher, Nikolaj Dietrich, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Polycomb group proteins bind throughout the INK4A-ARF locus and are disassociated in senescent cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Dev (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1101/gad.415507"}], "href": "https://doi.org/10.1101/gad.415507"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17344414"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17344414"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Ru Cao, Yu-Ichi Tsukada, Yi Zhang "}, {"type": "b", "children": [{"type": "t", "text": "Role of Bmi-1 and Ring1A in H2A ubiquitylation and Hox gene silencing."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2005.12.002"}], "href": "https://doi.org/10.1016/j.molcel.2005.12.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16359901"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16359901"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Carly Leung, Merel Lingbeek, Olga Shakhova, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bmi1 is essential for cerebellar development and is overexpressed in human medulloblastomas."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature02385"}], "href": "https://doi.org/10.1038/nature02385"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15029199"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15029199"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Gennadi V Glinsky, Olga Berezovska, Anna B Glinskii "}, {"type": "b", "children": [{"type": "t", "text": "Microarray analysis identifies a death-from-cancer signature predicting therapy failure in patients with multiple types of cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI23412"}], "href": "https://doi.org/10.1172/JCI23412"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15931389"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15931389"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Sophia W M Bruggeman, Danielle Hulsman, Ellen Tanger, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bmi1 controls tumor development in an Ink4a/Arf-independent manner in a mouse model for glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Cell (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.ccr.2007.08.032"}], "href": "https://doi.org/10.1016/j.ccr.2007.08.032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17936558"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17936558"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Anna V Molofsky, Shenghui He, Mohammad Bydon, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bmi-1 promotes neural stem cell self-renewal and neural development but not mouse growth and survival by repressing the p16Ink4a and p19Arf senescence pathways."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Dev (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1101/gad.1299505"}], "href": "https://doi.org/10.1101/gad.1299505"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15964994"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15964994"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Sophia W M Bruggeman, Merel E Valk-Lingbeek, Petra P M van der Stoop, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ink4a and Arf differentially affect cell proliferation and neural stem cell self-renewal in Bmi1-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Dev (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1101/gad.1299305"}], "href": "https://doi.org/10.1101/gad.1299305"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15964995"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15964995"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Sangeeta Dhawan, Shuen-Ing Tschen, Anil Bhushan "}, {"type": "b", "children": [{"type": "t", "text": "Bmi-1 regulates the Ink4a/Arf locus to control pancreatic beta-cell proliferation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Genes Dev (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1101/gad.1742609"}], "href": "https://doi.org/10.1101/gad.1742609"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19390085"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19390085"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Jie Liu, Liu Cao, Jichun Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bmi1 regulates mitochondrial function and the DNA damage response pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature08040"}], "href": "https://doi.org/10.1038/nature08040"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19404261"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19404261"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Yang Zhou, Li Wang, Haley Ruth Vaseghi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Bmi1 Is a Key Epigenetic Barrier to Direct Cardiac Reprogramming."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Stem Cell (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.stem.2016.02.003"}], "href": "https://doi.org/10.1016/j.stem.2016.02.003"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26942853"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26942853"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Eugenio Sangiorgi, Mario R Capecchi "}, {"type": "b", "children": [{"type": "t", "text": "Bmi1 is expressed in vivo in intestinal stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ng.165"}], "href": "https://doi.org/10.1038/ng.165"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18536716"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18536716"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Hua Tian, Brian Biehs, Søren Warming, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A reserve stem cell population in small intestine renders Lgr5-positive cells dispensable."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nature (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nature10408"}], "href": "https://doi.org/10.1038/nature10408"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21927002"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21927002"}]}]}]}
Synonyms RN5S5
NCBI Gene ID 100169756
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Predicted Functions View RNA5S5's ARCHS4 Predicted Functions.
Co-expressed Genes View RNA5S5's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View RNA5S5's ARCHS4 Predicted Functions.

Functional Associations

RNA5S5 has 107 functional associations with biological entities spanning 1 categories (cell line, cell type or tissue) extracted from 1 datasets.

Click the + buttons to view associations for RNA5S5 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of RNA5S5 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.