RNU7-1 Gene

HGNC Family Non-coding RNAs
Name RNA, U7 small nuclear 1
Description Implicated in Aicardi-Goutieres syndrome. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRNU7-1 encodes the RNA component of the U7 small nuclear ribonucleoprotein (U7 snRNP) complex, which is essential for the proper 3′ end processing of replication-dependent histone pre-mRNAs. Dysfunctional RNU7-1, as observed in certain cases of Aicardi‐Goutiérès syndrome, results in misprocessing of canonical histone transcripts, thereby perturbing the balance of histone proteins integrated into chromatin. This disruption in histone stoichiometry is critical because it undermines chromatin packaging, ultimately facilitating inappropriate access of self-DNA to cytosolic sensors."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nThe aberrant processing of histone pre-mRNAs due to RNU7-1 mutations leads to deficiencies in linker histone incorporation, thereby destabilizing the chromatin structure and exposing nuclear DNA to innate immune sensors. This altered chromatin environment triggers the activation of cyclic guanosine monophosphate-adenosine monophosphate synthase (cGAS), which in turn provokes signaling through the stimulator of interferon genes (STING) pathway. Such events culminate in the robust production of type I interferons, thus linking defective histone pre-mRNA processing with autoinflammatory responses."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nCollectively, these findings underscore the pivotal role of RNU7-1 in maintaining chromatin integrity by directing the precise processing of replication-dependent histone transcripts. When RNU7-1 function is compromised, the resultant histone imbalances precipitate chromatin decompaction that is immunogenic, ultimately invoking a cGAS-mediated interferon response that contributes to the pathogenesis of type I interferonopathies, such as Aicardi‐Goutiérès syndrome."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Carolina Uggenti, Alice Lepelley, Marine Depp, et al. "}, {"type": "b", "children": [{"type": "t", "text": "cGAS-mediated induction of type I interferon due to inborn errors of histone pre-mRNA processing."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Genet (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41588-020-00737-3"}], "href": "https://doi.org/10.1038/s41588-020-00737-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33230297"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33230297"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Leslie Naesens, Josephine Nemegeer, Filip Roelens, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mutations in RNU7-1 Weaken Secondary RNA Structure, Induce MCP-1 and CXCL10 in CSF, and Result in Aicardi-Goutières Syndrome with Severe End-Organ Involvement."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Immunol (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10875-022-01209-5"}], "href": "https://doi.org/10.1007/s10875-022-01209-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35320431"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35320431"}]}]}]}
Synonyms U7.1, RNU7
NCBI Gene ID 100147744
API
Download Associations
Predicted Functions View RNU7-1's ARCHS4 Predicted Functions.
Co-expressed Genes View RNU7-1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View RNU7-1's ARCHS4 Predicted Functions.

Functional Associations

RNU7-1 has 310 functional associations with biological entities spanning 5 categories (molecular profile, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for RNU7-1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq tissue samples with high or low expression of RNU7-1 gene relative to other tissue samples from the Allen Brain Atlas Developing Human Brain Tissue Gene Expression Profiles by RNA-seq dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of RNU7-1 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of RNU7-1 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
ESCAPE Omics Signatures of Genes and Proteins for Stem Cells PubMedIDs of publications reporting gene signatures containing RNU7-1 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing RNU7-1 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of RNU7-1 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of RNU7-1 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of RNU7-1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of RNU7-1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.