| HGNC Family | Non-coding RNAs |
| Name | RNA, variant U1 small nuclear 7 |
| Description | Predicted to enable pre-mRNA 5'-splice site binding activity. Predicted to be involved in mRNA 5'-splice site recognition. Predicted to be part of U1 snRNP. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nProgrammed cell death 5 (PDCD5) has emerged as a multifunctional modulator of cellular homeostasis, notably through its regulation of p53‐mediated apoptosis. Under genotoxic stress conditions, PDCD5 facilitates the dissociation of histone deacetylase 3 (HDAC3) from p53, leading to HDAC3 cleavage and its subsequent ubiquitin‐dependent degradation. In addition, the interaction with YY1‐associated factor 2 stabilizes PDCD5 and ensures effective TP53 activation, thereby promoting apoptosis as an adaptive response to cellular stress."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its role in apoptosis, PDCD5 contributes critically to immune regulation. It interacts with FOXP3 and, together with Tip60, enhances FOXP3 acetylation and stability, thus promoting the differentiation and suppressive function of regulatory T cells. Moreover, PDCD5 is essential for the terminal maturation and lineage commitment of invariant natural killer T (iNKT) cells, in part by stabilizing transcription factors that facilitate T‐bet expression early in iNKT cell development."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nPDCD5 also plays multifaceted roles in tissue remodeling and fibrotic responses. In pulmonary fibrosis, increased expression of PDCD5 in club cells induces β‐catenin/Smad3 complex formation and TGF‐β–mediated transcription of matricellular genes, thereby contributing to fibrotic pathology. In the heart, overexpression of PDCD5 enhances basal autophagy and suppresses apoptosis, protecting against β‐adrenergic–induced cardiac hypertrophy and fibrosis. In the vasculature, PDCD5 modulates endothelial function by interfering with HDAC3–AKT interactions, which in turn affects downstream eNOS phosphorylation and nitric oxide production, with implications for atherosclerosis. Furthermore, in the setting of cerebral ischemia, knockout studies reveal that loss of PDCD5 protects against ischemic injury by maintaining VHL levels and attenuating hypoxia‐induced apoptotic and autophagic cascades. Finally, genetic deletion of PDCD5 in mouse embryos leads to defective placental development, impaired growth factor signaling through the Pik3ca–Akt–mTOR cascade, and embryonic lethality, underscoring its pivotal role in embryogenesis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition to its roles in apoptosis, immunity, and tissue remodeling, PDCD5 participates in age‐related and metabolic processes. Its expression progressively increases in cochlear hair cells and spiral ganglion neurons with aging, an effect accompanied by enhanced caspase‐3 activity and apoptosis that contributes to presbycusis. Moreover, PDCD5 is widely expressed in tissues such as skeletal muscle, where emerging studies suggest it may influence insulin resistance, a key determinant of metabolic syndrome."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "10", "end_ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFinally, PDCD5 appears to modulate pathological processes in inflammatory and neoplastic diseases. Increased serum PDCD5 levels have been observed in allergic asthma, implicating it in the regulation of inflammatory responses. In the context of erythroleukemia, the TFAR19 gene, functionally linked to PDCD5, diminishes disease severity—an effect that is augmented in the presence of chemotherapeutic agents—highlighting the potential of targeting PDCD5‐associated pathways for therapeutic intervention."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hyo-Kyoung Choi, Youngsok Choi, Eun Sung Park, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Programmed cell death 5 mediates HDAC3 decay to promote genotoxic stress response."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms8390"}], "href": "https://doi.org/10.1038/ncomms8390"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26077467"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26077467"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Soo-Yeon Park, Hyo-Kyoung Choi, Seong-Ho Jo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "YAF2 promotes TP53-mediated genotoxic stress response via stabilization of PDCD5."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochim Biophys Acta (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbamcr.2015.01.006"}], "href": "https://doi.org/10.1016/j.bbamcr.2015.01.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25603536"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25603536"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Juan Xiao, Chen Liu, Ge Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PDCD5 negatively regulates autoimmunity by upregulating FOXP3(+) regulatory T cells and suppressing Th17 and Th1 responses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Autoimmun (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jaut.2013.08.002"}], "href": "https://doi.org/10.1016/j.jaut.2013.08.002"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24012345"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24012345"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Ke Wang, Xinwei Zhang, Yifan Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PDCD5 regulates iNKT cell terminal maturation and iNKT1 fate decision."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Mol Immunol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41423-018-0059-2"}], "href": "https://doi.org/10.1038/s41423-018-0059-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29921968"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29921968"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Soo-Yeon Park, Jung Yeon Hong, Soo Yeon Lee, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Club cell-specific role of programmed cell death 5 in pulmonary fibrosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-021-23277-8"}], "href": "https://doi.org/10.1038/s41467-021-23277-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34011956"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34011956"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Shu Zhang, Ge Li, Xin Fu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PDCD5 protects against cardiac remodeling by regulating autophagy and apoptosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2015.04.032"}], "href": "https://doi.org/10.1016/j.bbrc.2015.04.032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25881505"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25881505"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Seung-Hyun Lee, Jaesung Seo, Soo-Yeon Park, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Programmed cell death 5 suppresses AKT-mediated cytoprotection of endothelium."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1712918115"}], "href": "https://doi.org/10.1073/pnas.1712918115"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29588416"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29588416"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Jianfei Lu, Zhao Jiang, Yingyu Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Knockout of programmed cell death 5 (PDCD5) gene attenuates neuron injury after middle cerebral artery occlusion in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.brainres.2016.09.005"}], "href": "https://doi.org/10.1016/j.brainres.2016.09.005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27608954"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27608954"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Ge Li, Chentong Xu, Xin Lin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deletion of Pdcd5 in mice led to the deficiency of placenta development and embryonic lethality."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/cddis.2017.124"}], "href": "https://doi.org/10.1038/cddis.2017.124"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28542142"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28542142"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Yan Wang, Hanqi Chu, Liangqiang Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Correlation of PDCD5 and apoptosis in hair cells and spiral ganglion neurons of different age of C57BL/6J mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Huazhong Univ Sci Technolog Med Sci (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11596-012-0020-z"}], "href": "https://doi.org/10.1007/s11596-012-0020-z"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22282256"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22282256"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Bo Li, Jingjing Ye, Ruxia Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Programmed cell death 5 improves skeletal muscle insulin resistance by inhibiting IRS-1 ubiquitination through stabilization of MDM2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Life Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.lfs.2021.119918"}], "href": "https://doi.org/10.1016/j.lfs.2021.119918"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34480939"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34480939"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Yan Wang, Han-qi Chu, Liang-qiang Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "[Expression of PDCD5 and caspase 3 in the cochlea of different age of C57BL/6J mice]."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Zhonghua Er Bi Yan Hou Tou Jing Wai Ke Za Zhi (2011)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22177044"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22177044"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Xiaolin Diao, Juan Wang, Hong Zhu, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Effects of TFAR19 gene on the in vivo biorheological properties and pathogenicity of mouse erythroleukemia cell line MEL."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci China C Life Sci (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11427-007-0007-3"}], "href": "https://doi.org/10.1007/s11427-007-0007-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17393091"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17393091"}]}]}]}
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| Synonyms | RNU1-9, RNU1-9P, RNVU1-9, VU1.7, VU1.9, RNU1-6P, RNU1-6, RNU1-26P |
| NCBI Gene ID | 26864 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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RNVU1-7 has 104 functional associations with biological entities spanning 2 categories (chemical, cell line, cell type or tissue) extracted from 3 datasets.
Click the + buttons to view associations for RNVU1-7 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of RNVU1-7 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of RNVU1-7 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of RNVU1-7 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |