Name | selenoprotein T |
Description | This gene encodes a selenoprotein, containing a selenocysteine (Sec) residue at the active site. Sec is encoded by the UGA codon that normally signals translation termination. The 3' UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon rather than as a stop signal. This protein is localized in the endoplasmic reticulum. It belongs to the SelWTH family that possesses a thioredoxin-like fold and a conserved CxxU (C is cysteine, U is Sec) motif found in several redox active proteins. Studies in mice indicate a crucial role for this gene in the protection of dopaminergic neurons against oxidative stress in Parkinson's disease, and in the control of glucose homeostasis in pancreatic beta-cells. Pseudogenes of this locus have been identified on chromosomes 9 and 5. [provided by RefSeq, Sep 2017] |
Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent studies have revealed that the human selenoproteome, which comprises 25 distinct selenoproteins synthesized with the unique amino acid selenocysteine, plays diverse roles in cellular redox regulation and homeostasis. Among these, SELENOT has attracted attention as a redox-active protein and a member of this unique protein family, discovered through improved computational identification methods that distinguish UGA’s dual role in coding and termination."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nInvestigations in pancreatic islets have shown that SELENOT is a thioredoxin-like protein predominantly expressed in insulin- and somatostatin-producing cells. Functionally, conditional deletion of SELENOT in pancreatic β-cells in mice resulted in impaired glucose tolerance, a decrease in insulin secretion, and altered islet morphology, suggesting that SELENOT plays a critical role in modulating glucose homeostasis. Furthermore, its up-regulation by pituitary adenylate cyclase-activating polypeptide (PACAP) indicates that it may be a key mediator in a feed-forward mechanism to enhance insulin secretion."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the context of cardiac pathology, SELENOT has emerged as an important redox sensor in hypertrophied cardiomyocytes. A peptide mimicking its redox-active domain—PSELT—was shown to confer significant cardioprotection in models of heart failure by attenuating inflammation, reducing fibrosis, mitigating cellular damage, and improving contractile function. Moreover, the regulation of SELENOT production and secretion in response to hypertrophic stress suggests that it not only contributes to acute cell survival mechanisms but may also serve as a biomarker reflecting the extent of myocardial injury."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Gregory V Kryukov, Sergi Castellano, Sergey V Novoselov, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Characterization of mammalian selenoproteomes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Science (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/science.1083516"}], "href": "https://doi.org/10.1126/science.1083516"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12775843"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12775843"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Gaëtan Prevost, Arnaud Arabo, Long Jian, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The PACAP-regulated gene selenoprotein T is abundantly expressed in mouse and human β-cells and its targeted inactivation impairs glucose tolerance."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Endocrinology (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/en.2013-1167"}], "href": "https://doi.org/10.1210/en.2013-1167"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23913443"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23913443"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Anna De Bartolo, Teresa Pasqua, Naomi Romeo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The redox-active defensive Selenoprotein T as a novel stress sensor protein playing a key role in the pathophysiology of heart failure."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Transl Med (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12967-024-05192-w"}], "href": "https://doi.org/10.1186/s12967-024-05192-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38643121"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38643121"}]}]}]}
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NCBI Gene ID | 51714 |
API | |
Download Associations | |
Predicted Functions |
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Co-expressed Genes |
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Expression in Tissues and Cell Lines |
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SELENOT has 2,214 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, chemical, disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 32 datasets.
Click the + buttons to view associations for SELENOT from the datasets below.
If available, associations are ranked by standardized value
Dataset | Summary | |
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CCLE Cell Line Proteomics | Cell lines associated with SELENOT protein from the CCLE Cell Line Proteomics dataset. | |
CellMarker Gene-Cell Type Associations | cell types associated with SELENOT gene from the CellMarker Gene-Cell Type Associations dataset. | |
ChEA Transcription Factor Targets 2022 | transcription factors binding the promoter of SELENOT gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets 2022 dataset. | |
COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing SELENOT protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with SELENOT protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
DeepCoverMOA Drug Mechanisms of Action | small molecule perturbations with high or low expression of SELENOT protein relative to other small molecule perturbations from the DeepCoverMOA Drug Mechanisms of Action dataset. | |
DepMap CRISPR Gene Dependency | cell lines with fitness changed by SELENOT gene knockdown relative to other cell lines from the DepMap CRISPR Gene Dependency dataset. | |
DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with SELENOT gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
DisGeNET Gene-Disease Associations | diseases associated with SELENOT gene in GWAS and other genetic association datasets from the DisGeNET Gene-Disease Associations dataset. | |
DisGeNET Gene-Phenotype Associations | phenotypes associated with SELENOT gene in GWAS and other genetic association datasets from the DisGeNET Gene-Phenoptype Associations dataset. | |
GO Biological Process Annotations 2023 | biological processes involving SELENOT gene from the curated GO Biological Process Annotations 2023 dataset. | |
GO Biological Process Annotations 2025 | biological processes involving SELENOT gene from the curated GO Biological Process Annotations2025 dataset. | |
GO Cellular Component Annotations 2023 | cellular components containing SELENOT protein from the curated GO Cellular Component Annotations 2023 dataset. | |
GO Cellular Component Annotations 2025 | cellular components containing SELENOT protein from the curated GO Cellular Component Annotations 2025 dataset. | |
GTEx eQTL 2025 | SNPs regulating expression of SELENOT gene from the GTEx eQTL 2025 dataset. | |
GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of SELENOT gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
IMPC Knockout Mouse Phenotypes | phenotypes of mice caused by SELENOT gene knockout from the IMPC Knockout Mouse Phenotypes dataset. | |
LINCS L1000 CMAP Chemical Perturbation Consensus Signatures | small molecule perturbations changing expression of SELENOT gene from the LINCS L1000 CMAP Chemical Perturbations Consensus Signatures dataset. | |
LINCS L1000 CMAP CRISPR Knockout Consensus Signatures | gene perturbations changing expression of SELENOT gene from the LINCS L1000 CMAP CRISPR Knockout Consensus Signatures dataset. | |
MGI Mouse Phenotype Associations 2023 | phenotypes of transgenic mice caused by SELENOT gene mutations from the MGI Mouse Phenotype Associations 2023 dataset. | |
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of SELENOT gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
PFOCR Pathway Figure Associations 2023 | pathways involving SELENOT protein from the PFOCR Pathway Figure Associations 2023 dataset. | |
PFOCR Pathway Figure Associations 2024 | pathways involving SELENOT protein from the Wikipathways PFOCR 2024 dataset. | |
Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of SELENOT gene from the Replogle et al., Cell, 2022 K562 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of SELENOT gene from the Replogle et al., Cell, 2022 K562 Genome-wide Perturb-seq Gene Perturbation Signatures dataset. | |
Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures | gene perturbations changing expression of SELENOT gene from the Replogle et al., Cell, 2022 RPE1 Essential Perturb-seq Gene Perturbation Signatures dataset. | |
RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of SELENOT gene from the RummaGEO Drug Perturbation Signatures dataset. | |
RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of SELENOT gene from the RummaGEO Gene Perturbation Signatures dataset. | |
TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of SELENOT protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of SELENOT protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with SELENOT protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |
WikiPathways Pathways 2024 | pathways involving SELENOT protein from the WikiPathways Pathways 2024 dataset. | |