| Name | septin 12 |
| Description | This gene encodes a guanine-nucleotide binding protein and member of the septin family of cytoskeletal GTPases. Septins play important roles in cytokinesis, exocytosis, embryonic development, and membrane dynamics. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nSEPTIN12 is a testis‐specific member of the septin GTPase family that plays a pivotal role in the terminal differentiation of male germ cells. It is essential for proper sperm morphogenesis by forming filamentous structures that contribute notably to the formation of the sperm tail annulus and overall structural integrity. Loss‐of‐function mutations impair septin filament assembly, leading to defective annulus formation, abnormal head–tail junctions, and other sperm morphological abnormalities. These defects have been associated with various forms of male infertility, including asthenozoospermia and teratozoospermia."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMechanistically, SEPTIN12 interacts with other septin family members (such as SEPT7, SEPT6, SEPT2, and SEPT4) to assemble into octameric filaments, a process critically dependent on its GTP-binding domain. These filaments not only provide structural support but also interact with key cytoskeletal elements, including α- and β-tubulins, and with membrane-associated proteins like NDC1 and SUN5 to ensure proper sperm head–tail coupling. Disruption of these interactions through missense mutations or truncated variants interferes with filament formation, perturbing the organization of the sperm neck region and overall tail structure."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "8"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nGenetic studies of SEPTIN12 have revealed several variants—including mutations such as T89M, D197N, c.474G>A, and p.Gln225Lys—that compromise its function and correlate with distinct spermatogenic failures, including non-obstructive azoospermia and meiotic arrest. In addition, transcriptional studies show that its expression is tightly regulated by androgen and estrogen receptor elements in the promoter region, underlining the importance of hormonal control in spermatogenesis. These findings underscore that proper SEPTIN12 function and regulation are critical for the assembly of the sperm annulus and for maintaining nuclear integrity, thereby safeguarding male fertility."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "9", "end_ref": "13"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yung-Che Kuo, Ying-Hung Lin, Hau-Inh Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SEPT12 mutations cause male infertility with defective sperm annulus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mutat (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/humu.22028"}], "href": "https://doi.org/10.1002/humu.22028"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22275165"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22275165"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ying-Hung Lin, Yung-Ming Lin, Ya-Yun Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The expression level of septin12 is critical for spermiogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Pathol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2353/ajpath.2009.080955"}], "href": "https://doi.org/10.2353/ajpath.2009.080955"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19359518"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19359518"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Yung-Che Kuo, Yi-Ru Shen, Hau-Inh Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SEPT12 orchestrates the formation of mammalian sperm annulus by organizing core octameric complexes with other SEPT proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Sci (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/jcs.158998"}], "href": "https://doi.org/10.1242/jcs.158998"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25588830"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25588830"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Ying-Hung Lin, Ya-Yun Wang, Hau-Inh Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SEPTIN12 genetic variants confer susceptibility to teratozoospermia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0034011"}], "href": "https://doi.org/10.1371/journal.pone.0034011"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22479503"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22479503"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Pao-Lin Kuo, Han-Sun Chiang, Ya-Yun Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SEPT12-microtubule complexes are required for sperm head and tail formation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms141122102"}], "href": "https://doi.org/10.3390/ijms141122102"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24213608"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24213608"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Tsung-Hsuan Lai, Ying-Yu Wu, Ya-Yun Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SEPT12-NDC1 Complexes Are Required for Mammalian Spermiogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms17111911"}], "href": "https://doi.org/10.3390/ijms17111911"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27854341"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27854341"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Xiangming Ding, Wenbo Yu, Ming Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SEPT12 interacts with SEPT6 and this interaction alters the filament structure of SEPT6 in Hela cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biochem Mol Biol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.5483/bmbrep.2007.40.6.973"}], "href": "https://doi.org/10.5483/bmbrep.2007.40.6.973"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18047794"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18047794"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Yunfei Zhang, Gang Liu, Lihua Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SUN5 interacts with nuclear membrane LaminB1 and cytoskeletal GTPase Septin12 mediating the sperm head-and-tail junction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Hum Reprod (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/molehr/gaae022"}], "href": "https://doi.org/10.1093/molehr/gaae022"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38870534"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38870534"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Hiroe Miyakawa, Toshinobu Miyamoto, Eitetsu Koh, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Single-nucleotide polymorphisms in the SEPTIN12 gene may be a genetic risk factor for Japanese patients with Sertoli cell-only syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Androl (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2164/jandrol.110.012146"}], "href": "https://doi.org/10.2164/jandrol.110.012146"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21636737"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21636737"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Dongfeng Geng, Xiao Yang, Hongguo Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Association of single nucleotide polymorphism c.673C>A/p.Gln225Lys in SEPT12 gene with spermatogenesis failure in male idiopathic infertility in Northeast China."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Int Med Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/0300060518811770"}], "href": "https://doi.org/10.1177/0300060518811770"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30488758"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30488758"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Pao-Lin Kuo, Jie-Yun Tseng, Hau-Inh Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of SEPTIN12 as a novel target of the androgen and estrogen receptors in human testicular cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochimie (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.biochi.2018.11.018"}], "href": "https://doi.org/10.1016/j.biochi.2018.11.018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30513371"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30513371"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Gülçin Özkara, Nagehan Ersoy Tunali "}, {"type": "b", "children": [{"type": "t", "text": "SEPTIN12 c.474 G > A polymorphism as a risk factor in teratozoospermic patients."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Rep (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11033-021-06417-7"}], "href": "https://doi.org/10.1007/s11033-021-06417-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34057684"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34057684"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Toshinobu Miyamoto, Akira Tsujimura, Yasushi Miyagawa, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Single nucleotide polymorphisms in the SEPTIN12 gene may be associated with azoospermia by meiotic arrest in Japanese men."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Assist Reprod Genet (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10815-011-9679-5"}], "href": "https://doi.org/10.1007/s10815-011-9679-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22116646"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22116646"}]}]}]}
|
| NCBI Gene ID | 124404 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
SEPTIN12 has 1,174 functional associations with biological entities spanning 6 categories (disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 25 datasets.
Click the + buttons to view associations for SEPTIN12 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SEPTIN12 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| ClinVar Gene-Phenotype Associations 2025 | phenotypes associated with SEPTIN12 gene from the curated ClinVar Gene-Phenotype Associations 2025 dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of SEPTIN12 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores 2025 | cellular components containing SEPTIN12 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 | cellular components containing SEPTIN12 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores 2025 dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with SEPTIN12 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Experimental Gene-Disease Association Evidence Scores 2025 | diseases associated with SEPTIN12 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with SEPTIN12 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GO Biological Process Annotations 2025 | biological processes involving SEPTIN12 gene from the curated GO Biological Process Annotations2025 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing SEPTIN12 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GO Molecular Function Annotations 2025 | molecular functions performed by SEPTIN12 gene from the curated GO Molecular Function Annotations 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of SEPTIN12 gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of SEPTIN12 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with SEPTIN12 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of SEPTIN12 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of SEPTIN12 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| KEGG Pathways 2026 | pathways involving SEPTIN12 protein from the KEGG Pathways 2026 dataset. | |
| NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles | drug perturbations changing expression of SEPTIN12 gene from the NIBR DRUG-seq U2OS MoA Box dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of SEPTIN12 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of SEPTIN12 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of SEPTIN12 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of SEPTIN12 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 | tissues with high expression of SEPTIN12 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores 2025 dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with SEPTIN12 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |
| WikiPathways Pathways 2024 | pathways involving SEPTIN12 protein from the WikiPathways Pathways 2024 dataset. | |