| Name | serine rich and transmembrane domain containing 2 |
| Description | Predicted to be located in membrane. Predicted to be active in intracellular membrane-bounded organelle. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nStudies of the flavin‐containing monooxygenase (FMO) gene family have revealed that these enzymes exhibit pronounced cell-, tissue-, sex-, and developmental stage‐specific expression profiles that underpin their classical roles in xenobiotic metabolism. For example, different FMO isoforms display distinct distribution patterns in mouse liver, kidney, lung, and brain, emphasizing the complexity and specialization of these enzymes in regulating chemical transformations in vivo."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nRecent investigations have expanded the biological roles of FMOs beyond drug metabolism. Mouse models deficient in several FMO isoforms demonstrate altered energy homeostasis, including a lean phenotype with increased resting energy expenditure and enhanced fatty acid oxidation, while other studies have linked FMO1 to the biosynthesis of taurine from hypotaurine. These complementary studies, along with biochemical analyses of recombinant FMO isoforms, underscore the emerging concept that FMOs contribute to endogenous metabolic regulation."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "2", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn a novel development extending the spectrum of genes implicated in mammalian physiology, SERTM2—also known as CARDEL or LINC00890—has been identified as a critical regulatory factor during cardiac development. Detailed temporal gene-expression analyses in human pluripotent stem cells and in fetal and adult heart tissues reveal that SERTM2 expression coincides with commitment to the cardiac lineage. Functional studies further demonstrated that knockout of SERTM2 impairs the differentiation of cardiac cells, while its controlled overexpression modulates cardiomyocyte beating rates, thereby shaping the cardiac gene network that governs cell-fate commitment."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Azara Janmohamed, Diana Hernandez, Ian R Phillips, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cell-, tissue-, sex- and developmental stage-specific expression of mouse flavin-containing monooxygenases (Fmos)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Pharmacol (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bcp.2004.02.036"}], "href": "https://doi.org/10.1016/j.bcp.2004.02.036"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15183119"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15183119"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Sunil Veeravalli, Bilal A Omar, Lyndsey Houseman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The phenotype of a flavin-containing monooyxgenase knockout mouse implicates the drug-metabolizing enzyme FMO1 as a novel regulator of energy balance."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Pharmacol (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bcp.2014.04.007"}], "href": "https://doi.org/10.1016/j.bcp.2014.04.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24792439"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24792439"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Sunil Veeravalli, Ian R Phillips, Rafael T Freire, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Flavin-Containing Monooxygenase 1 Catalyzes the Production of Taurine from Hypotaurine."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Drug Metab Dispos (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1124/dmd.119.089995"}], "href": "https://doi.org/10.1124/dmd.119.089995"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32156684"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32156684"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jun Zhang, Matt A Cerny, Matt Lawson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional activity of the mouse flavin-containing monooxygenase forms 1, 3, and 5."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biochem Mol Toxicol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jbt.20176"}], "href": "https://doi.org/10.1002/jbt.20176"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17721934"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17721934"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Diana Hernandez, Azara Janmohamed, Pritpal Chandan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deletion of the mouse Fmo1 gene results in enhanced pharmacological behavioural responses to imipramine."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pharmacogenet Genomics (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1097/FPC.0b013e328328d507"}], "href": "https://doi.org/10.1097/FPC.0b013e328328d507"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19262426"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19262426"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Isabela T Pereira, Rubens Gomes-Júnior, Aruana Hansel-Frose, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Cardiac Development Long Non-Coding RNA ("}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "CARDEL"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": ") Is Activated during Human Heart Development and Contributes to Cardiac Specification and Homeostasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cells (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/cells13121050"}], "href": "https://doi.org/10.3390/cells13121050"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38920678"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38920678"}]}]}]}
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| NCBI Gene ID | 401613 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SERTM2 has 1,152 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 14 datasets.
Click the + buttons to view associations for SERTM2 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SERTM2 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of SERTM2 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with SERTM2 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with SERTM2 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GO Cellular Component Annotations 2025 | cellular components containing SERTM2 protein from the curated GO Cellular Component Annotations 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of SERTM2 gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of SERTM2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| GWAS Catalog SNP-Phenotype Associations 2025 | phenotypes associated with SERTM2 gene in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations 2025 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of SERTM2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of SERTM2 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of SERTM2 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of SERTM2 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of SERTM2 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with SERTM2 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |