| Name | surfactant associated 1, pseudogene |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nSFTA1P is a pseudogene‐derived long non‐coding RNA that has recently emerged as an important regulator in human cancers. In non‐small cell lung cancer, studies have shown that SFTA1P expression is significantly reduced in tumor tissues compared with normal tissues. This downregulation correlates with poor survival outcomes, and forced overexpression of SFTA1P was found to induce S‐phase cell cycle arrest and inhibit the PI3K–AKT signaling pathway, suggesting a tumor‐suppressor role in lung adenocarcinoma."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn contrast, in gastric cancer SFTA1P is markedly downregulated relative to adjacent normal tissues, and its decreased expression is associated with advanced tumor stage, larger tumor size, lymphatic metastasis, and poorer prognosis. Functional studies demonstrated that reintroducing SFTA1P inhibits cell proliferation, migration, and invasion, potentially via the modulation of TP53 expression. These findings further corroborate the notion that SFTA1P may act as a tumor suppressor in certain cancer contexts."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nInterestingly, the role of SFTA1P appears to be context‐dependent. In cervical cancer, SFTA1P is found to be upregulated in tumor tissues, and high expression levels correlate with worse clinical outcomes. Mechanistic investigations revealed that SFTA1P interacts with the polypyrimidine tract binding protein 1 (PTBP1) to promote the degradation of tropomyosin 4 (TPM4) mRNA, thereby enhancing cell proliferation, migration, invasion, and metastasis. This oncogenic activity in cervical cancer highlights the complex, tissue‐specific functions of SFTA1P and suggests that targeting the SFTA1P–PTBP1–TPM4 axis could represent a novel therapeutic strategy."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hua Zhang, Yaqiong Xiong, Rui Xia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The pseudogene-derived long noncoding RNA SFTA1P is down-regulated and suppresses cell migration and invasion in lung adenocarcinoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Tumour Biol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1177/1010428317691418"}], "href": "https://doi.org/10.1177/1010428317691418"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28231733"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28231733"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Dandan Du, Xian Shen, Yanqiu Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Expression of long non-coding RNA SFTA1P and its function in non-small cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pathol Res Pract (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.prp.2020.153049"}], "href": "https://doi.org/10.1016/j.prp.2020.153049"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32825934"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32825934"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hongwei Ma, Tianshi Ma, Miao Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The pseudogene-derived long non-coding RNA SFTA1P suppresses cell proliferation, migration, and invasion in gastric cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biosci Rep (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BSR20171193"}], "href": "https://doi.org/10.1042/BSR20171193"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29523596"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29523596"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Aoran Luo, Xiaoxiao Lan, Qiongzi Qiu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA SFTA1P promotes cervical cancer progression by interaction with PTBP1 to facilitate TPM4 mRNA degradation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-022-05359-7"}], "href": "https://doi.org/10.1038/s41419-022-05359-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36344495"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36344495"}]}]}]}
|
| Synonyms | SFTPF |
| NCBI Gene ID | 207107 |
| API | |
| Download Associations | |
| Predicted Functions |
![]() |
| Co-expressed Genes |
![]() |
| Expression in Tissues and Cell Lines |
![]() |
SFTA1P has 918 functional associations with biological entities spanning 6 categories (molecular profile, organism, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 26 datasets.
Click the + buttons to view associations for SFTA1P from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of SFTA1P gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of SFTA1P gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SFTA1P gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of SFTA1P gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SFTA1P gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SFTA1P gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SFTA1P gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SFTA1P gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SFTA1P gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SFTA1P gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing SFTA1P from the GeneSigDB Published Gene Signatures dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of SFTA1P gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of SFTA1P gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SFTA1P gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of SFTA1P gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of SFTA1P gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of SFTA1P gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SFTA1P gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| GTEx Tissue-Specific Aging Signatures | tissue samples with high or low expression of SFTA1P gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset. | |
| HuBMAP Azimuth Cell Type Annotations | cell types associated with SFTA1P gene from the HuBMAP Azimuth Cell Type Annotations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SFTA1P gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SFTA1P gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of SFTA1P gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SFTA1P gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SFTA1P gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of SFTA1P gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |