SLIT1-AS1 Gene

Name SLIT1 antisense RNA 1
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nIn one study (referenced in"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ", researchers characterized a syntenic gene cluster in humans and mice that encodes a family of secreted proteins with three‐fingered protein/Ly-6/uPAR domains. These proteins, exemplified by the founding PATE gene and its related family members, are primarily expressed in reproductive tissues—most notably the prostate and testis—as well as in neuron‐rich regions. The study demonstrated that these secreted PATE-like proteins play roles in modulating nicotinic acetylcholine receptors, implicating them in both reproductive functions and neural transmission.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nNotably, while the investigation provided extensive insight into the roles of the PATE-like gene family, it did not address the function of the long noncoding RNA SLIT1-AS1. Although SLIT1-AS1 is mentioned in the query, the abstract from PubMed ID 18387948 contains no information on its expression, regulation, or biological activity. This absence highlights an important gap that future research may need to address, particularly given the growing evidence that long noncoding RNAs can have significant regulatory roles in neural and reproductive processes.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, the study (referenced in"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "advances our understanding of secreted proteins in key physiological processes, yet it leaves the function of SLIT1-AS1 uncharacterized. Further dedicated investigations into SLIT1-AS1 may reveal novel regulatory mechanisms that complement the activities of the described PATE-like proteins in fertility, reproduction, and neural modulation.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Fiana Levitin, Mordechai Weiss, Yoonsoo Hahn, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PATE gene clusters code for multiple, secreted TFP/Ly-6/uPAR proteins that are expressed in reproductive and neuron-rich tissues and possess neuromodulatory activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M801454200"}], "href": "https://doi.org/10.1074/jbc.M801454200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18387948"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18387948"}]}]}]}
NCBI Gene ID 100505540
API
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Predicted Functions View SLIT1-AS1's ARCHS4 Predicted Functions.
Co-expressed Genes View SLIT1-AS1's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SLIT1-AS1's ARCHS4 Predicted Functions.

Functional Associations

SLIT1-AS1 has 146 functional associations with biological entities spanning 2 categories (cell line, cell type or tissue, gene, protein or microRNA) extracted from 3 datasets.

Click the + buttons to view associations for SLIT1-AS1 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SLIT1-AS1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of SLIT1-AS1 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SLIT1-AS1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.