SMCR2 Gene

Name Smith-Magenis syndrome chromosome region, candidate 2 (non-protein coding)
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe study associated with PMID"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "primarily investigates SLITRK4 in the context of gastric cancer and its propensity for liver metastasis, emphasizing its established role in the nervous system—particularly in synapse formation. Although SMCR2 is not explicitly mentioned in the provided abstract, by considering its nomenclature and its potential membership in a related gene family, one might infer that SMCR2 could play a complementary role in modulating cell–cell interactions and signal transduction pathways that are pivotal in both neural development and oncogenic processes.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nExtrapolating from the known functions of SLITRK4, it is reasonable to hypothesize that SMCR2 may influence cellular adhesion and communication, processes that could affect tumor cell migration and metastatic behavior. This analogy points to a possible role for SMCR2 in the regulation of pathways that, when dysregulated, facilitate cancer progression and metastasis.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the abstract under PMID"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "does not directly address SMCR2, insights into the biological activity of SLITRK4 suggest that SMCR2 may be involved in similar cellular mechanisms—most notably in mediating cell signaling and adhesion, with potential implications for cancer metastasis. Further targeted studies would be necessary to elucidate the precise functional contributions of SMCR2 in these processes.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yao-Qi Zhou, Tian-Shang Bao, Jia-Xuan Xie, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The SLITRK4-CNPY3 axis promotes liver metastasis of gastric cancer by enhancing the endocytosis and recycling of TrkB in tumour cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Oncol (Dordr) (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s13402-023-00795-9"}], "href": "https://doi.org/10.1007/s13402-023-00795-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37012514"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37012514"}]}]}]}
Synonyms TCONS_00025215
NCBI Gene ID 105371564
API
Download Associations
Predicted Functions View SMCR2's ARCHS4 Predicted Functions.
Co-expressed Genes View SMCR2's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SMCR2's ARCHS4 Predicted Functions.

Functional Associations

SMCR2 has 6 functional associations with biological entities spanning 3 categories (disease, phenotype or trait, cell line, cell type or tissue, gene, protein or microRNA) extracted from 3 datasets.

Click the + buttons to view associations for SMCR2 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
DISEASES Experimental Gene-Disease Association Evidence Scores diseases associated with SMCR2 gene in GWAS datasets from the DISEASES Experimental Gene-Disease Assocation Evidence Scores dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of SMCR2 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of SMCR2 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.