| Name | small integral membrane protein 31 |
| Description | Predicted to be located in membrane. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nIn pancreatic cancer and oral squamous cell carcinoma, LINC01207 acts as an oncogenic long non‐coding RNA. In pancreatic cancer, it is highly expressed relative to adjacent tissues and functions by sponging miR‑143‑5p to upregulate AGR2, thereby promoting cell proliferation while suppressing apoptosis and autophagy. Similarly, in oral squamous cell carcinoma, elevated LINC01207 enhances cell viability, colony formation, and migration by interacting with miR‑1301‑3p to derepress LDHA, and its silencing leads to increased apoptotic and autophagic activity."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn gastric cancer, although LINC01207 has been identified as an oncogene in several malignancies, its specific molecular functions and underlying mechanisms remain poorly understood, warranting further investigation into its role in gastric tumorigenesis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nContrasting with its oncogenic roles in some cancers, in malignant glioma LINC01207 appears to function as a tumor suppressor. Lower expression of LINC01207 in glioma tissue is associated with unfavorable clinical features, including lower Karnofsky performance scores, increased invasion, and higher tumor grade. Functionally, reduced LINC01207 levels contribute to enhanced cell proliferation and metastatic potential, while its upregulation induces G0/G1 cell cycle arrest and represses epithelial-to-mesenchymal transition via modulation of the GSK‑3β/β‑catenin signaling pathway, collectively correlating with improved patient survival."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Chang Liu, Jin-Ou Wang, Wen-Yang Zhou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC01207 silencing suppresses AGR2 expression to facilitate autophagy and apoptosis of pancreatic cancer cells by sponging miR-143-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Endocrinol (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.mce.2019.04.004"}], "href": "https://doi.org/10.1016/j.mce.2019.04.004"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30991076"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30991076"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Xiaolin Lu, Liling Chen, Yang Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long non-coding RNA LINC01207 promotes cell proliferation and migration but suppresses apoptosis and autophagy in oral squamous cell carcinoma by the microRNA-1301-3p/lactate dehydrogenase isoform A axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2021.1972784"}], "href": "https://doi.org/10.1080/21655979.2021.1972784"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34463208"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34463208"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Lan Yu, Yanwei Gao, Beibei Ji, et al. "}, {"type": "b", "children": [{"type": "t", "text": "CTCF-induced upregulation of LINC01207 promotes gastric cancer progression via miR-1301-3p/PODXL axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dig Liver Dis (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.dld.2020.12.006"}], "href": "https://doi.org/10.1016/j.dld.2020.12.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33495099"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33495099"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Dapeng Chi, Wei Zhang, Yulong Jia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LINC01207 Predicts Poor Prognosis and Suppresses Cell Growth and Metastasis via Regulating GSK-3β/β-Catenin Signaling Pathway in Malignant Glioma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Med Sci Monit (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.12659/MSM.923189"}], "href": "https://doi.org/10.12659/MSM.923189"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32533688"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32533688"}]}]}]}
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| NCBI Gene ID | 100505989 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SMIM31 has 1,152 functional associations with biological entities spanning 6 categories (functional term, phrase or reference, disease, phenotype or trait, chemical, cell line, cell type or tissue, gene, protein or microRNA, sequence feature) extracted from 15 datasets.
Click the + buttons to view associations for SMIM31 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SMIM31 gene relative to other tissue samples from the Allen Brain Atlas Aging Dementia and Traumatic Brain Injury Tissue Sample Gene Expression Profiles dataset. | |
| CM4AI KOLF21J CRISPRi Gene Perturbation Atlas | gene perturbations changing expression of SMIM31 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 | cellular components co-occuring with SMIM31 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores 2025 dataset. | |
| DISEASES Text-mining Gene-Disease Association Evidence Scores 2025 | diseases co-occuring with SMIM31 gene in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores 2025 dataset. | |
| GTEx eQTL 2025 | SNPs regulating expression of SMIM31 gene from the GTEx eQTL 2025 dataset. | |
| GTEx Tissue Gene Expression Profiles 2023 | tissues with high or low expression of SMIM31 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles 2023 dataset. | |
| JASPAR Predicted Human Transcription Factor Targets 2025 | transcription factors regulating expression of SMIM31 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset. | |
| JASPAR Predicted Mouse Transcription Factor Targets 2025 | transcription factors regulating expression of SMIM31 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset. | |
| MoTrPAC Rat Endurance Exercise Training | tissue samples with high or low expression of SMIM31 gene relative to other tissue samples from the MoTrPAC Rat Endurance Exercise Training dataset. | |
| Rummagene Transcription Factor Associations 2026 | transcription factors regulating expression of SMIM31 gene from the Rummagene Transcription Factor Associations 2026 dataset. | |
| RummaGEO Drug Perturbation Signatures | drug perturbations changing expression of SMIM31 gene from the RummaGEO Drug Perturbation Signatures dataset. | |
| RummaGEO Gene Perturbation Signatures | gene perturbations changing expression of SMIM31 gene from the RummaGEO Gene Perturbation Signatures dataset. | |
| Sci-Plex Drug Perturbation Signatures | drug perturbations changing expression of SMIM31 gene from the Sci-Plex Drug Perturbation Signatures dataset. | |
| Tahoe Therapeutics Tahoe 100M Perturbation Atlas | drug perturbations changing expression of SMIM31 gene from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 | tissues co-occuring with SMIM31 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores 2025 dataset. | |