SMIM40 Gene

Name small integral membrane protein 40
Description Predicted to be located in membrane. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe provided body of literature offers in‐depth analyses of growth hormone (GH) signaling through its receptor (GHR) and the downstream effectors that regulate a wide array of physiological processes—from metabolism and tissue growth to regeneration, immune modulation, and aging. These studies, employing whole‐body, tissue‐specific, and inducible knockout models (e.g., in liver, fat, muscle, and brain), delineate how alterations in GHR‐mediated pathways (including JAK/STAT, IGF‑I, mTOR, and others) affect insulin sensitivity, adiposity, bone acquisition, and even lifespan. Notably, however, none of the examined abstracts make any mention of SMIM40, nor do they provide evidence that links this protein to any function within the GH signaling cascade or its systemic outcomes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nWithin the context of these comprehensive evaluations of GH and GHR biology—ranging from studies of GHR cleavage and tissue‐specific ablation (e.g., in muscle, adipose, and macrophages) to investigations into liver regeneration, reproductive function, and the interplay with metabolic and stress response pathways—the role of small integral membrane proteins (which, by name, would include SMIM40) could be hypothesized as potential modulators of receptor localization or signal transduction. However, none of these abstracts present data regarding SMIM40. Instead, they consistently focus on classical components of the GH/IGF‑I axis, providing little to no insight into whether SMIM40 interacts with, regulates, or is regulated by these pathways."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "21", "end_ref": "35"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the extensive investigations summarized above underscore the critical influence of GH/GHR signaling on diverse biological functions—including metabolic regulation, tissue development and regeneration, and lifespan extension—they do not provide any direct information regarding SMIM40. Its function within these pathways, if any, remains undefined in the current literature. Future studies will be required to determine whether SMIM40, as a small integral membrane protein, may have regulatory or ancillary roles in modulating GH receptor signaling or cellular responses to GH. Until such data are available, SMIM40 cannot be conclusively linked to the well‐documented actions of GH presented in these studies."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "36", "end_ref": "50"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Yuxiang Sun, Pei Wang, Hui Zheng, et al. 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NCBI Gene ID 113523636
API
Download Associations
Predicted Functions View SMIM40's ARCHS4 Predicted Functions.
Co-expressed Genes View SMIM40's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SMIM40's ARCHS4 Predicted Functions.

Functional Associations

SMIM40 has 904 functional associations with biological entities spanning 3 categories (chemical, functional term, phrase or reference, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for SMIM40 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Carcinogenome Chemical Perturbation Carcinogenicity Signatures small molecule perturbations changing expression of SMIM40 gene from the Carcinogenome Chemical Perturbation Carcinogenicity Signatures dataset.
CM4AI KOLF21J CRISPRi Gene Perturbation Atlas gene perturbations changing expression of SMIM40 gene from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas dataset.
JASPAR Predicted Human Transcription Factor Targets 2025 transcription factors regulating expression of SMIM40 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Human Transcription Factor Targets dataset.
JASPAR Predicted Mouse Transcription Factor Targets 2025 transcription factors regulating expression of SMIM40 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Mouse Transcription Factor Targets 2025 dataset.
NIBR DRUG-seq U2OS MoA Box Gene Expression Profiles drug perturbations changing expression of SMIM40 gene from the NIBR DRUG-seq U2OS MoA Box dataset.
Rummagene Transcription Factor Associations 2026 transcription factors regulating expression of SMIM40 gene from the Rummagene Transcription Factor Associations 2026 dataset.
RummaGEO Drug Perturbation Signatures drug perturbations changing expression of SMIM40 gene from the RummaGEO Drug Perturbation Signatures dataset.
RummaGEO Gene Perturbation Signatures gene perturbations changing expression of SMIM40 gene from the RummaGEO Gene Perturbation Signatures dataset.
WikiPathways Pathways 2024 pathways involving SMIM40 protein from the WikiPathways Pathways 2024 dataset.