| Name | small nucleolar RNA host gene 10 |
| Description | This gene is small nucleolar RNA host gene 10 and represents a non-protein coding RNA. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jan 2013] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nSNHG10, a long noncoding RNA, plays diverse roles in tumorigenesis that vary in a context‐dependent manner. In hepatocellular carcinoma, SNHG10 acts as an oncogenic driver by sponging miR‑150‑5p and enhancing c‑Myb expression to promote tumor growth and metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " In gastric cancer, although its function is not yet fully elucidated, SNHG10 has been recognized as an oncogene, underscoring its potential as a diagnostic and therapeutic target."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " In contrast, investigations in non‑small cell lung cancer (NSCLC) indicate that SNHG10 is downregulated, with low levels predicting poorer overall survival; here, SNHG10 appears to function as a tumor suppressor by sponging miR‑543 and ultimately upregulating the tumor‑suppressive sirtuin 1 (SIRT1)."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "4"}]}, {"type": "t", "text": " Similarly, studies in osteosarcoma have aimed to decipher its role in modulating miR‑218"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ", while in triple‑negative breast cancer (TNBC) SNHG10 is found downregulated—especially after doxorubicin treatment—and its overexpression leads to demethylation‐mediated upregulation of miR‑302b, promoting apoptosis and countering chemoresistance."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "7"}]}, {"type": "t", "text": " In castration‑resistant prostate cancer (CRPC), elevated SNHG10 in docetaxel‑resistant cells contributes to a resistant phenotype by acting as a molecular sponge for miR‑1271‑5p, thereby enhancing TRIM66 expression and facilitating glycolysis and cell survival."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its oncological implications, SNHG10 also contributes to myocardial injury. In a cardiomyocyte hypoxia/reoxygenation model with sevoflurane postconditioning, reduced SNHG10 levels are associated with protective effects against oxidative stress and inflammation. Conversely, SNHG10 overexpression impairs sevoflurane‑mediated protection by sponging miR‑495‑3p, which normally targets PTEN; this leads to increased PTEN expression, modified HIF‑1α levels, and ultimately exacerbated cardiomyocyte damage."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "9"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Tian Lan, Kefei Yuan, Xiaokai Yan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA SNHG10 Facilitates Hepatocarcinogenesis and Metastasis by Modulating Its Homolog SCARNA13 via a Positive Feedback Loop."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Res (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/0008-5472.CAN-18-4044"}], "href": "https://doi.org/10.1158/0008-5472.CAN-18-4044"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31101763"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31101763"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Yunfei Zhang, Hongyan Guo, Hong Zhang "}, {"type": "b", "children": [{"type": "t", "text": "SNHG10/DDX54/PBX3 Feedback Loop Contributes to Gastric Cancer Cell Growth."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dig Dis Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10620-020-06488-9"}], "href": "https://doi.org/10.1007/s10620-020-06488-9"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32712782"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32712782"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Xiu Yuan, Tianwen Yang, Yun Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "SNHG10 Promotes Cell Proliferation and Migration in Gastric Cancer by Targeting miR-495-3p/CTNNB1 Axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Dig Dis Sci (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10620-020-06576-w"}], "href": "https://doi.org/10.1007/s10620-020-06576-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32920660"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32920660"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Zhe Zhang, Li Nong, Meng-Lei Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Long Noncoding RNA SNHG10 Sponges miR-543 to Upregulate Tumor Suppressive SIRT1 in Nonsmall Cell Lung Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Biother Radiopharm (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/cbr.2019.3334"}], "href": "https://doi.org/10.1089/cbr.2019.3334"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32319822"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32319822"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Meng Liang, Linlin Wang, Chuanhua Cao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA SNHG10 is downregulated in non-small cell lung cancer and predicts poor survival."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Pulm Med (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12890-020-01281-w"}], "href": "https://doi.org/10.1186/s12890-020-01281-w"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33081752"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33081752"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Pan He, Yongqiang Xu, Zhijun Wang "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA SNHG10 increases the methylation of miR-218 gene to promote glucose uptake and cell proliferation in osteosarcoma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Orthop Surg Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13018-020-01865-6"}], "href": "https://doi.org/10.1186/s13018-020-01865-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32843060"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32843060"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Shataer Aini, Shayiti Bolati, Wei Ding, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LncRNA SNHG10 suppresses the development of doxorubicin resistance by downregulating miR-302b in triple-negative breast cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2022.2063592"}], "href": "https://doi.org/10.1080/21655979.2022.2063592"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35506202"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35506202"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Hongwen Cao, Dan Wang, Peng Sun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Zhoushi Qi Ling decoction represses docetaxel resistance and glycolysis of castration-resistant prostate cancer via regulation of SNHG10/miR-1271-5p/TRIM66 axis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Aging (Albany NY) (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.18632/aging.203602"}], "href": "https://doi.org/10.18632/aging.203602"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34613933"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34613933"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Jiandong He, Jing Yu, Chongfang Han, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The SNHG10-miR-495-3p-PTEN axis is involved in sevoflurane-mediated protective effects in cardiomyocytes against hypoxia/reoxygenation injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Toxicol In Vitro (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.tiv.2023.105724"}], "href": "https://doi.org/10.1016/j.tiv.2023.105724"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37884162"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37884162"}]}]}]}
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| Synonyms | C14ORF62, NCRNA00063, LINC00063 |
| NCBI Gene ID | 283596 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNHG10 has 2,402 functional associations with biological entities spanning 7 categories (molecular profile, organism, disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 24 datasets.
Click the + buttons to view associations for SNHG10 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of SNHG10 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset. | |
| Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles | tissues with high or low expression of SNHG10 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset. | |
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNHG10 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of SNHG10 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNHG10 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SNHG10 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNHG10 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| CTD Gene-Disease Associations | diseases associated with SNHG10 gene/protein from the curated CTD Gene-Disease Associations dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNHG10 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNHG10 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNHG10 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| ESCAPE Omics Signatures of Genes and Proteins for Stem Cells | PubMedIDs of publications reporting gene signatures containing SNHG10 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of SNHG10 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SNHG10 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of SNHG10 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Viral Infections | virus perturbations changing expression of SNHG10 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of SNHG10 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SNHG10 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNHG10 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of SNHG10 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of SNHG10 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SNHG10 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNHG10 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of SNHG10 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |