| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, H/ACA box 11C |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe collection of studies provided does not directly address SNORA11C. Instead, these abstracts focus on the diverse roles of methionine aminopeptidase‐2 (MetAP2) in regulating cellular processes such as angiogenesis, tumor cell proliferation, and tissue remodeling. Although SNORA11C—a small nucleolar RNA typically involved in RNA modification—is not mentioned in any of these reports, the work collectively underscores how precise modulation of protein processing by MetAP2 is critical for various biological outcomes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFor instance, one study demonstrated that the interaction between S100A4 and MetAP2 may affect the intracellular distribution of MetAP2 (thus potentially influencing its substrate processing activity), which in turn plays a role in endothelial cell growth and tumor metastasis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Additional investigations using conditional knockout models and RNA interference highlighted an essential role for MetAP2 in endothelial cell proliferation and even in orchestrating the circadian regulation of its own transcription, further establishing its impact on angiogenesis and cancer progression."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "2", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther reports expanded on the spectrum of MetAP2’s activity by identifying specific protein substrates through advanced proteomic techniques and by demonstrating its involvement in fibrotic lung disease, skeletal muscle differentiation, lymphangiogenesis, and even cardioprotection against ischemia/reperfusion injury."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "9"}]}, {"type": "t", "text": " While these findings considerably advance our understanding of MetAP2’s multifaceted functions, they do not provide information regarding SNORA11C. Future work may explore whether SNORA11C, or other small nucleolar RNAs, intersect with the regulatory networks influenced by MetAP2, thereby linking RNA modification processes to the pathways governing cell proliferation and angiogenesis.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Hideya Endo, Keizo Takenaga, Takayuki Kanno, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Methionine aminopeptidase 2 is a new target for the metastasis-associated protein, S100A4."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M202244200"}], "href": "https://doi.org/10.1074/jbc.M202244200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11994292"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11994292"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jing-Ruey J Yeh, Rong Ju, Cathleen M Brdlik, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Targeted gene disruption of methionine aminopeptidase 2 results in an embryonic gastrulation defect and endothelial cell growth arrest."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0511313103"}], "href": "https://doi.org/10.1073/pnas.0511313103"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16790550"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16790550"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "L A Tucker, Q Zhang, G S Sheppard, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ectopic expression of methionine aminopeptidase-2 causes cell transformation and stimulates proliferation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oncogene (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/onc.2008.14"}], "href": "https://doi.org/10.1038/onc.2008.14"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18264137"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18264137"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Hiroo Nakagawa, Satoru Koyanagi, Takako Takiguchi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "24-hour oscillation of mouse methionine aminopeptidase2, a regulator of tumor progression, is regulated by clock gene proteins."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cancer Res (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/0008-5472.CAN-04-2122"}], "href": "https://doi.org/10.1158/0008-5472.CAN-04-2122"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15548701"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15548701"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Scott E Warder, Lora A Tucker, Shaun M McLoughlin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Discovery, identification, and characterization of candidate pharmacodynamic markers of methionine aminopeptidase-2 inhibition."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Proteome Res (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/pr800388p"}], "href": "https://doi.org/10.1021/pr800388p"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18828628"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18828628"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Daniel Kass, Robert Stone Bridges, Alain Borczuk, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Methionine aminopeptidase-2 as a selective target of myofibroblasts in pulmonary fibrosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Respir Cell Mol Biol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1165/rcmb.2006-0352OC"}], "href": "https://doi.org/10.1165/rcmb.2006-0352OC"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17446530"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17446530"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Bansidhar Datta, Rekha Datta, Avijit Majumdar, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The stability of eukaryotic initiation factor 2-associated glycoprotein, p67, increases during skeletal muscle differentiation and that inhibits the phosphorylation of extracellular signal-regulated kinases 1 and 2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Exp Cell Res (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.yexcr.2004.09.018"}], "href": "https://doi.org/10.1016/j.yexcr.2004.09.018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15572037"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15572037"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Rawnaq Esa, Eliana Steinberg, Dvir Dror, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Role of Methionine Aminopeptidase 2 in Lymphangiogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms21145148"}], "href": "https://doi.org/10.3390/ijms21145148"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32708166"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32708166"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Tana S Pottorf, Micaella P Fagan, Bryan F Burkey, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MetAP2 inhibition reduces food intake and body weight in a ciliopathy mouse model of obesity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "JCI Insight (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/jci.insight.134278"}], "href": "https://doi.org/10.1172/jci.insight.134278"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31877115"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31877115"}]}]}]}
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| NCBI Gene ID | 100124540 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORA11C has 163 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.
Click the + buttons to view associations for SNORA11C from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA11C gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA11C gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA11C gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORA11C gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SNORA11C gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA11C gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SNORA11C gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORA11C gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |