| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, H/ACA box 25 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts mention SNORA25 or describe its function, the collective literature instead offers extensive insights into the multifaceted roles of miR‐30a (in its various isoforms) in regulating autophagy, cell survival, inflammation, and differentiation in diverse biological contexts. For example, several studies demonstrate that miR‐30a modulates autophagy by directly targeting key effectors such as beclin 1 in cancer and cardiac cells, thereby influencing chemoresistance and hypertrophy."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther reports highlight that miR‐30a—whether acting alone or as part of competitive endogenous RNA networks—also plays pivotal roles in suppressing or exacerbating cellular injury. In ischemia/reperfusion models, neurodegeneration, and inflammatory conditions, altered levels of miR‐30a (including the −5p and −3p forms) regulate apoptosis, oxidative stress, and key signalling pathways by targeting molecules such as Neurod1, HSPA5, CLCF1, and Notch1."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "7", "end_ref": "11"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn addition, miR‐30a is implicated in the regulation of differentiation processes and tissue remodelling. Its involvement spans from controlling osteogenic differentiation and adipocyte function to modulating the fate of spermatogonial stem cells and even influencing immunoregulatory T‐cell subsets, as well as contributing to pathological angiogenesis in retinal and pulmonary tissues."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "12", "end_ref": "16"}]}, {"type": "t", "text": " \n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the function of SNORA25 remains unexplored in these abstracts, the reported studies collectively reveal that miR‐30a family members are central modulators of autophagy, apoptosis, inflammation, and differentiation in numerous pathophysiological processes. This contrast underscores the need for further research to determine whether small nucleolar RNAs such as SNORA25 may similarly contribute to the regulation of these complex cellular networks."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "17", "end_ref": "21"}]}, {"type": "t", "text": " \n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Xiaomin Zhong, Ning Li, Shun Liang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Identification of microRNAs regulating reprogramming factor LIN28 in embryonic stem cells and cancer cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M110.169607"}], "href": "https://doi.org/10.1074/jbc.M110.169607"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20947512"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20947512"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Zhenyou Zou, Linping Wu, Hanying Ding, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-30a sensitizes tumor cells to cis-platinum via suppressing beclin 1-mediated autophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M111.307405"}], "href": "https://doi.org/10.1074/jbc.M111.307405"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22157765"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22157765"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Peng Wang, Nan Zhang, Jia Liang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Micro-RNA-30a regulates ischemia-induced cell death by targeting heat shock protein HSPA5 in primary cultured cortical neurons and mouse brain after stroke."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci Res (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jnr.23637"}], "href": "https://doi.org/10.1002/jnr.23637"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26301516"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26301516"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Xuesong Yin, Chenghai Peng, Wenhu Ning, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "MiR-30a-5p Suppresses Tumor Metastasis of Human Colorectal Cancer by Targeting ITGB3."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Physiol Biochem (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1159/000447823"}], "href": "https://doi.org/10.1159/000447823"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27576787"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27576787"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Xiaodong Fu, Yi Shen, Weili Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MiR-30a-5p ameliorates spinal cord injury-induced inflammatory responses and oxidative stress by targeting Neurod 1 through MAPK/ERK signalling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Clin Exp Pharmacol Physiol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/1440-1681.12856"}], "href": "https://doi.org/10.1111/1440-1681.12856"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28925510"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28925510"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Ting Sun, Kaiyue Zhao, Mimin Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "miR-30a-5p induces Aβ production via inhibiting the nonamyloidogenic pathway in Alzheimer's disease."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Pharmacol Res (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.phrs.2022.106153"}], "href": "https://doi.org/10.1016/j.phrs.2022.106153"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35257899"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35257899"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "He-Da Zhang, Lin-Hong Jiang, Da-Wei Sun, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "BMP9-induced osteogenic differentiation is partially inhibited by miR-30a in the mesenchymal stem cell line C3H10T1/2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Mol Histol (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10735-015-9628-1"}], "href": "https://doi.org/10.1007/s10735-015-9628-1"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26205653"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26205653"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Maryam Khanehzad, Seyed Mehdi Nourashrafeddin, Farid Abolhassani, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Suppression of bone remodeling associated with long-term bisphosphonate treatment is mediated by microRNA-30a-5p."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Bioengineered (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/21655979.2022.2060584"}], "href": "https://doi.org/10.1080/21655979.2022.2060584"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35412438"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35412438"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Sandra L Grimm, Samuel Reddick, Xiaoyu Dong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Loss of microRNA-30a and sex-specific effects on the neonatal hyperoxic lung injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biol Sex Differ (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s13293-023-00535-6"}], "href": "https://doi.org/10.1186/s13293-023-00535-6"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37553579"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37553579"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Dong Guo, Ji Ma, Lei Yan, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Epithelial microRNA-30a-3p targets RUNX2/HMGB1 axis to suppress airway eosinophilic inflammation in asthma."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Respir Res (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/s12931-022-01933-x"}], "href": "https://doi.org/10.1186/s12931-022-01933-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35093061"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35093061"}]}]}]}
|
| Synonyms | ACA25, SNORA25A |
| NCBI Gene ID | 684959 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORA25 has 1,503 functional associations with biological entities spanning 5 categories (molecular profile, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 25 datasets.
Click the + buttons to view associations for SNORA25 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA25 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| CCLE Cell Line Gene Expression Profiles | cell lines with high or low expression of SNORA25 gene relative to other cell lines from the CCLE Cell Line Gene Expression Profiles dataset. | |
| COMPARTMENTS Curated Protein Localization Evidence Scores | cellular components containing SNORA25 protein from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Experimental Protein Localization Evidence Scores | cellular components containing SNORA25 protein in low- or high-throughput protein localization assays from the COMPARTMENTS Experimental Protein Localization Evidence Scores dataset. | |
| COMPARTMENTS Text-mining Protein Localization Evidence Scores | cellular components co-occuring with SNORA25 protein in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA25 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORA25 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA25 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORA25 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of SNORA25 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of SNORA25 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SNORA25 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations | transcription factor perturbations changing expression of SNORA25 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of SNORA25 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SNORA25 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SNORA25 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA25 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of SNORA25 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| MiRTarBase microRNA Targets | microRNAs targeting SNORA25 gene in low- or high-throughput microRNA targeting studies from the MiRTarBase microRNA Targets dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SNORA25 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORA25 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of SNORA25 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |
| TISSUES Curated Tissue Protein Expression Evidence Scores | tissues with high expression of SNORA25 protein from the TISSUES Curated Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Experimental Tissue Protein Expression Evidence Scores | tissues with high expression of SNORA25 protein in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset. | |
| TISSUES Text-mining Tissue Protein Expression Evidence Scores | tissues co-occuring with SNORA25 protein in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset. | |