| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, H/ACA box 5C |
| Description | Small nucleolar RNAs (snoRNAs) are small noncoding RNAs involved in RNA processing. Box H/ACA snoRNAs, such as SNORA5C, direct the conversion of uridine to pseudouridine at specific residues of ribosomal RNAs or small nuclear RNAs (snRNAs) (Gu et al., 2005).[supplied by OMIM, Mar 2008] |
| Summary |
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This core function is fundamental to the maintenance of cellular bioenergetics and survival in response to cellular stress."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its role in mitochondrial clearance, FUNDC1 critically influences cell fate by modulating diverse death pathways such as apoptosis, necroptosis, and PANoptosis. Its activity affects inflammatory signaling by controlling the release of mitochondrial DNA and regulating inflammasome activation, which in turn modulates the production of proinflammatory cytokines like interleukin‑1β. Such regulatory functions have been implicated in conditions ranging from hepatocellular carcinoma and chronic obstructive pulmonary disease to cerebral hemorrhage and hypoxic pulmonary hypertension. Moreover, FUNDC1‐mediated mitophagy is essential for proper differentiation of progenitor cells and for maintaining the balance between mitochondrial fission and fusion in stressed cardiomyocytes, thereby influencing tissue remodeling and repair processes."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "15"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nDysregulation of FUNDC1-mediated mitophagy has profound pathological and therapeutic implications. Inadequate FUNDC1 activity contributes to the progression of liver fibrosis, pancreatic β‑cell lipotoxicity, cardiomyocyte dysfunction in cardiorenal syndrome, and neuronal injury following ischemia/reperfusion, as well as to neurodegenerative conditions such as amyotrophic lateral sclerosis. Moreover, enhanced platelet mitophagy driven by elevated FUNDC1 levels has been linked to hyperactivity in diabetes. Interventions that modulate FUNDC1—whether by genetic manipulation, exercise-induced upregulation, or pharmacological inhibition using specific peptide inhibitors—offer promising strategies toward restoring mitochondrial homeostasis and mitigating tissue injury in these diverse pathologies."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "16", "end_ref": "22"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Wen Li, Xingli Zhang, Haixia Zhuang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "MicroRNA-137 is a novel hypoxia-responsive microRNA that inhibits mitophagy via regulation of two mitophagy receptors FUNDC1 and NIX."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M113.537050"}], "href": "https://doi.org/10.1074/jbc.M113.537050"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24573672"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24573672"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Weilin Zhang, Sami Siraj, Rong Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mitophagy receptor FUNDC1 regulates mitochondrial homeostasis and protects the heart from I/R injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Autophagy (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15548627.2017.1300224"}], "href": "https://doi.org/10.1080/15548627.2017.1300224"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28323531"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28323531"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hao Zhou, Pingjun Zhu, Jun Guo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Ripk3 induces mitochondrial apoptosis via inhibition of FUNDC1 mitophagy in cardiac IR injury."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Redox Biol (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.redox.2017.07.007"}], "href": "https://doi.org/10.1016/j.redox.2017.07.007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28732308"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28732308"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Shengnan Wu, Qiulun Lu, Qilong Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Binding of FUN14 Domain Containing 1 With Inositol 1,4,5-Trisphosphate Receptor in Mitochondria-Associated Endoplasmic Reticulum Membranes Maintains Mitochondrial Dynamics and Function in Hearts in Vivo."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circulation (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCULATIONAHA.117.030235"}], "href": "https://doi.org/10.1161/CIRCULATIONAHA.117.030235"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28942427"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28942427"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Hao Zhou, Pingjun Zhu, Jin Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Pathogenesis of cardiac ischemia reperfusion injury is associated with CK2α-disturbed mitochondrial homeostasis via suppression of FUNDC1-related mitophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Differ (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41418-018-0086-7"}], "href": "https://doi.org/10.1038/s41418-018-0086-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29540794"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29540794"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Wenhui Li, Yanjun Li, Sami Siraj, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FUN14 Domain-Containing 1-Mediated Mitophagy Suppresses Hepatocarcinogenesis by Inhibition of Inflammasome Activation in Mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hepatology (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/hep.30191"}], "href": "https://doi.org/10.1002/hep.30191"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30053328"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30053328"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Mark A Lampert, Amabel M Orogo, Rita H Najor, et al. "}, {"type": "b", "children": [{"type": "t", "text": "BNIP3L/NIX and FUNDC1-mediated mitophagy is required for mitochondrial network remodeling during cardiac progenitor cell differentiation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Autophagy (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15548627.2019.1580095"}], "href": "https://doi.org/10.1080/15548627.2019.1580095"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30741592"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30741592"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Hao Wu, You Wang, Wenhui Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Deficiency of mitophagy receptor FUNDC1 impairs mitochondrial quality and aggravates dietary-induced obesity and metabolic syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Autophagy (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1080/15548627.2019.1596482"}], "href": "https://doi.org/10.1080/15548627.2019.1596482"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30898010"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30898010"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Wen Wen, Guoqing Yu, Wei Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Silencing FUNDC1 alleviates chronic obstructive pulmonary disease by inhibiting mitochondrial autophagy and bronchial epithelium cell apoptosis under hypoxic environment."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biochem (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcb.29028"}], "href": "https://doi.org/10.1002/jcb.29028"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31237014"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31237014"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Jia Huang, Tengfei Zhu, Rong Rong, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "FUNDC1 inhibits NLRP3-mediated inflammation after intracerebral hemorrhage by promoting mitophagy in mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurosci Lett (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neulet.2021.135967"}], "href": "https://doi.org/10.1016/j.neulet.2021.135967"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34022268"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34022268"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Zhaohui Pei, Yandong Liu, Suqin Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FUNDC1 insufficiency sensitizes high fat diet intake-induced cardiac remodeling and contractile anomaly through ACSL4-mediated ferroptosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Metabolism (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.metabol.2021.154840"}], "href": "https://doi.org/10.1016/j.metabol.2021.154840"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34331963"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34331963"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Qin Li, Yinghai Liu, Qingqing Huang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Hypoxia Acclimation Protects against Heart Failure Postacute Myocardial Infarction via Fundc1-Mediated Mitophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Oxid Med Cell Longev (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1155/2022/8192552"}], "href": "https://doi.org/10.1155/2022/8192552"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35422895"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35422895"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Ruxia Liu, Chunling Xu, Weilin Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FUNDC1-mediated mitophagy and HIF1α activation drives pulmonary hypertension during hypoxia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-022-05091-2"}], "href": "https://doi.org/10.1038/s41419-022-05091-2"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35864106"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35864106"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Yaguang Bi, Haixia Xu, Xiang Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FUNDC1 protects against doxorubicin-induced cardiomyocyte PANoptosis through stabilizing mtDNA via interaction with TUFM."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41419-022-05460-x"}], "href": "https://doi.org/10.1038/s41419-022-05460-x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36470869"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36470869"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Yaguang Bi, Shuolin Liu, Xing Qin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "FUNDC1 interacts with GPx4 to govern hepatic ferroptosis and fibrotic injury through a mitophagy-dependent manner."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Adv Res (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jare.2023.02.012"}], "href": "https://doi.org/10.1016/j.jare.2023.02.012"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36828120"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36828120"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Lijie Ma, Kaifeng Li, Wenxiang Wei, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Exercise protects aged mice against coronary endothelial senescence via FUNDC1-dependent mitophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Redox Biol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.redox.2023.102693"}], "href": "https://doi.org/10.1016/j.redox.2023.102693"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37030149"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37030149"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Chengnan Chu, Xinyu Wang, Fang Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Neutrophil extracellular traps aggravate intestinal epithelial necroptosis in ischaemia-reperfusion by regulating TLR4/RIPK3/FUNDC1-required mitophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Prolif (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/cpr.13538"}], "href": "https://doi.org/10.1111/cpr.13538"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37691112"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37691112"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Tianchi Tang, Li-Bin Hu, Chao Ding, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "FUDNC1-dependent mitophagy ameliorate motor neuron death in an amyotrophic lateral sclerosis mouse model."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Dis (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.nbd.2024.106534"}], "href": "https://doi.org/10.1016/j.nbd.2024.106534"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38759931"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38759931"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Junyan Wang, Haowen Zhuang, Lianqun Jia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Nuclear receptor subfamily 4 group A member 1 promotes myocardial ischemia/reperfusion injury through inducing mitochondrial fission factor-mediated mitochondrial fragmentation and inhibiting FUN14 domain containing 1-depedent mitophagy."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Biol Sci (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7150/ijbs.95853"}], "href": "https://doi.org/10.7150/ijbs.95853"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "39247823"}], "href": "https://pubmed.ncbi.nlm.nih.gov/39247823"}]}]}]}
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| Synonyms | ACA5C |
| NCBI Gene ID | 677796 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORA5C has 1,269 functional associations with biological entities spanning 4 categories (molecular profile, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 15 datasets.
Click the + buttons to view associations for SNORA5C from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA5C gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA5C gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SNORA5C gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA5C gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORA5C gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA5C gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORA5C gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SNORA5C gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of SNORA5C gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SNORA5C gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA5C gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles | cell lines with high or low expression of SNORA5C gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SNORA5C gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORA5C gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of SNORA5C gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |