| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, H/ACA box 77 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough SNORA77 is in general recognized as a small nucleolar RNA that directs chemical modifications of ribosomal RNA, the set of abstracts provided does not address SNORA77 per se but instead uniformly focuses on caspase‐6 – an executioner protease with diverse roles in cell death, inflammation, and tissue homeostasis. A number of studies demonstrate that caspase‐6 is activated downstream of initiator caspases and contributes to multiple programmed cell death pathways – including apoptosis, pyroptosis, necroptosis (sometimes termed PANoptosis) – as well as inflammasome activation and innate host defense against viral and bacterial infections. These findings indicate its critical role in shaping both cell death and inflammatory responses."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "6"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the nervous system, active caspase‐6 has been repeatedly implicated in neurodegenerative processes. Its cleavage activity of substrates such as CBP, lamin A/C, and huntingtin protein has been linked to synaptic dysfunction, axonal degeneration, and cognitive deficits observed in Alzheimer’s and Huntington disease models, as well as in developmental processes like lens fiber cell differentiation. In addition, caspase‐6 can be activated in response to neurotoxic stress and participate in non‐apoptotic synaptic remodeling, thereby influencing microglial activation and inflammatory cytokine release in the brain."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "7", "end_ref": "13"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nCaspase‐6 also plays important roles in immune regulation and inflammatory signaling. Several studies report that caspase‐6 activity modulates macrophage activation – for example, by cleaving inhibitors of TLR signaling such as IRAK‐M – which in turn affects cytokine production and inflammasome assembly. In adaptive immunity, caspase‐6 influences B‐cell activation and differentiation, thereby affecting immunoglobulin production and overall lymphocyte homeostasis. These functions underscore its capacity to orchestrate both innate and adaptive immune responses, and have spurred investigations into its potential as a therapeutic target in diseases characterized by aberrant inflammation or immune dysfunction."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "14", "end_ref": "22"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nBeyond its roles in cell death and immune regulation, caspase‐6 is implicated in additional processes that contribute to organismal homeostasis. For example, studies have demonstrated that caspase‐6 influences developmental cell fate decisions – regulating early B‐cell development and shaping post‐injury axonal degeneration. Its modulation has also been linked to alterations in synaptic transmission and pain hypersensitivity in contexts such as postoperative pain, while genetic ablation or pharmacological inhibition of caspase‐6 impacts neuroanatomical structures and behavioral outcomes. These diverse roles highlight caspase‐6 as a multifaceted regulator whose activity is further modulated by post‐translational modifications and interactions with proteins such as netrin‐1."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "23", "end_ref": "27"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOverall, the body of work compiled in these abstracts reveals caspase‐6 as a critical effector molecule whose activity spans the regulation of multiple cell death modalities, modulation of inflammatory and immune responses, influence on neural integrity and synaptic function, and participation in developmental as well as regenerative processes. While the original query mentioned SNORA77, the provided literature predominantly underscores the significance of caspase‐6 in pathological and physiological contexts, offering promising avenues for therapeutic intervention in infections, neurodegenerative diseases, and immune disorders.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Min Zheng, Rajendra Karki, Peter Vogel, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Antisense oligonucleotide-mediated disruption of HTT caspase-6 cleavage site ameliorates the phenotype of YAC128 Huntington disease mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Dis (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.nbd.2023.106368"}], "href": "https://doi.org/10.1016/j.nbd.2023.106368"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38040383"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38040383"}]}]}]}
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| Synonyms | ACA63, SNORA77A |
| NCBI Gene ID | 677843 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORA77 has 736 functional associations with biological entities spanning 4 categories (molecular profile, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 16 datasets.
Click the + buttons to view associations for SNORA77 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA77 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA77 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SNORA77 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA77 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORA77 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA77 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORA77 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GeneSigDB Published Gene Signatures | PubMedIDs of publications reporting gene signatures containing SNORA77 from the GeneSigDB Published Gene Signatures dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of SNORA77 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| GTEx Tissue Sample Gene Expression Profiles | tissue samples with high or low expression of SNORA77 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SNORA77 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORA77 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of SNORA77 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SNORA77 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORA77 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |
| TCGA Signatures of Differentially Expressed Genes for Tumors | tissue samples with high or low expression of SNORA77 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset. | |