SNORA7B Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, H/ACA box 7B
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe set of abstracts provided centers on the roles of bacterial effectors and host cell proteins in Salmonella pathogenesis and cardiac autophagy, with detailed investigations into the multifunctional effector SifA and the host protein Plekhm2. Notably, however, none of these studies address or mention any functional properties of SNORA7B. In the first abstract, SifA is demonstrated to be a critical virulence factor translocated into host cells where its N-terminal domain interacts with the pleckstrin homology domain of the host protein SKIP. This interaction is crucial for mobilizing the molecular motor kinesin-1 on the bacterial vacuole, and key structural motifs, including the WXXXE motif, are shown to be essential for SifA’s stability and proper translocation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nThe second abstract further dissects SifA’s functional architecture, revealing that its two distinct domains contribute to virulence. The N-terminal domain’s interaction with SKIP regulates vacuolar membrane dynamics, while the C-terminal domain plays a SKIP-independent role in promoting bacterial virulence, indicating that these domains are functionally connected and together orchestrate the cascade of events that facilitate Salmonella infection."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the third abstract, the focus shifts to the host protein Plekhm2, which regulates endosomal trafficking and lysosomal distribution. Loss of Plekhm2 impairs autophagy predominantly in cardiofibroblasts and results in compensatory mechanisms that mitigate stress induced by pathological stimuli such as angiotensin-II in the heart. This study highlights the tissue-specific roles of Plekhm2 in maintaining cellular homeostasis, although it does not provide any insights into SNORA7B function."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while these abstracts provide a detailed overview of Salmonella’s effector SifA and the host protein Plekhm2 in relation to virulence and autophagy respectively, they do not contain any information regarding the function of SNORA7B. Consequently, based on the provided literature, no conclusions can be drawn about SNORA7B’s biological role.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Lautaro Diacovich, Audrey Dumont, Daniel Lafitte, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Interaction between the SifA virulence factor and its host target SKIP is essential for Salmonella pathogenesis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M109.034975"}], "href": "https://doi.org/10.1074/jbc.M109.034975"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19801640"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19801640"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Weidong Zhao, Thomas Moest, Yaya Zhao, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Salmonella effector protein SifA plays a dual role in virulence."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep12979"}], "href": "https://doi.org/10.1038/srep12979"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26268777"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26268777"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Sharon Etzion, Raneen Hijaze, Liad Segal, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Plekhm2 acts as an autophagy modulator in murine heart and cardiofibroblasts."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41598-024-65670-5"}], "href": "https://doi.org/10.1038/s41598-024-65670-5"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38942823"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38942823"}]}]}]}
Synonyms ACA7B
NCBI Gene ID 677797
API
Download Associations
Predicted Functions View SNORA7B's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORA7B's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORA7B's ARCHS4 Predicted Functions.

Functional Associations

SNORA7B has 989 functional associations with biological entities spanning 4 categories (molecular profile, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 16 datasets.

Click the + buttons to view associations for SNORA7B from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORA7B gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
CellMarker Gene-Cell Type Associations cell types associated with SNORA7B gene from the CellMarker Gene-Cell Type Associations dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA7B gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of SNORA7B gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORA7B gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORA7B gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA7B gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORA7B gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of SNORA7B gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of SNORA7B gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of SNORA7B gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORA7B gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of SNORA7B gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of SNORA7B gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORA7B gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of SNORA7B gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.