SNORA80B Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, H/ACA box 80B
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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In contrast, SNORA80B—a small nucleolar RNA typically implicated in the post‑transcriptional modification of ribosomal or other small RNAs—is not addressed, and no functional data linking it to any CD40‐related process is provided."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "35"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the collected studies robustly explore the multifaceted roles of the CD40/CD40L axis in immune cell activation, tolerance, and disease pathogenesis, they do not provide any insight into the function of SNORA80B. Thus, within the context of this literature, no direct association can be drawn between SNORA80B and the immune regulatory mechanisms discussed—and the functional relevance of SNORA80B remains to be elucidated in other studies."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "35"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Andrew S MacDonald, Amy D Straw, Nicole M Dalton, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Short-circuiting long-lived humoral immunity by the heightened engagement of CD40."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2002)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI14110"}], "href": "https://doi.org/10.1172/JCI14110"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "11877469"}], "href": "https://pubmed.ncbi.nlm.nih.gov/11877469"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Jelena Mann, Fiona Oakley, Peter W M Johnson, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Reciprocal CD40 signals through p38MAPK and ERK-1/2 induce counteracting immune responses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Med (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/nm1045"}], "href": "https://doi.org/10.1038/nm1045"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15107845"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15107845"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Brian Zarnegar, Jeannie Q He, Gagik Oganesyan, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Unique CD40-mediated biological program in B cell activation requires both type 1 and type 2 NF-kappaB activation pathways."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2004)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0402629101"}], "href": "https://doi.org/10.1073/pnas.0402629101"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15148378"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15148378"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Eric M Jacobson, Erlinda Concepcion, Taiji Oashi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A Graves' disease-associated Kozak sequence single-nucleotide polymorphism enhances the efficiency of CD40 gene translation: a case for translational pathophysiology."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Endocrinology (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1210/en.2004-1617"}], "href": "https://doi.org/10.1210/en.2004-1617"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15731360"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15731360"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Julia Rastelli, Cornelia Hömig-Hölzel, Jane Seagal, et al. 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Synonyms ACA67B
NCBI Gene ID 100302743
API
Download Associations
Predicted Functions View SNORA80B's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORA80B's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORA80B's ARCHS4 Predicted Functions.

Functional Associations

SNORA80B has 1,249 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 14 datasets.

Click the + buttons to view associations for SNORA80B from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORA80B gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA80B gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of SNORA80B gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORA80B gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORA80B gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORA80B gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORA80B gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of SNORA80B gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of SNORA80B gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORA80B gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORA80B gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of SNORA80B gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of SNORA80B gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORA80B gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.