SNORD101 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 101
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts directly mention SNORD101, a synthesis of the studies reveals critical regulatory pathways in cellular metabolism that may intersect with post‐transcriptional mechanisms typically associated with small nucleolar RNAs. In one study, the maintenance of iron homeostasis by iron regulatory proteins was shown to be essential for embryonic development and cellular iron management, while in skeletal muscle, exercise-induced oxidative stress was found to modulate aconitase activity through redox and phosphorylation events. These findings underline how precise control over metabolic enzymes, such as mitochondrial aconitase, is crucial for balancing energy production and mitigating oxidative damage."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther investigations highlight the role of mitochondrial aconitase as a central node in preserving mitochondrial DNA integrity and in driving cellular responses to oxidative stress. In alveolar epithelial cells, interactions between aconitase and mitochondrial DNA repair enzymes help prevent oxidant-induced apoptosis, while in heart mitochondria, acetylation-dependent activation of aconitase was demonstrated in a high-fat diet model, establishing a link between post-translational modifications and metabolic flux. These studies collectively emphasize how modulations of enzyme activity ensure mitochondrial function and cellular survivability under stress."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurthermore, additional data extend the significance of mitochondrial aconitase to disease contexts; for example, nitric oxide–mediated metabolic rewiring in inflammatory macrophages illustrates how aconitase is functionally targeted to alter the tricarboxylic acid cycle, while studies in sperm capacitation reveal that sialylation at a key residue on aconitase leads to its inactivation and a shift from oxidative phosphorylation to glycolysis. In parallel, reduced aconitase levels have been linked to neurodegeneration in Parkinson’s disease and aggressive tumor behavior in non–small cell lung cancer, underscoring a multifaceted role in regulating iron homeostasis and cell proliferation. These diverse findings collectively underscore the importance of tight regulation of mitochondrial metabolism via post-transcriptional and post-translational modifications."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "8"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn sum, although SNORD101 is not explicitly featured in these abstracts, small nucleolar RNAs like SNORD101 are known to mediate post‐transcriptional modifications that can influence the stability and maturation of various RNAs. It is plausible to speculate that SNORD101 could participate in fine-tuning the expression or processing of transcripts coding for key metabolic enzymes—including mitochondrial aconitase—or other regulatory molecules within these pathways. Further investigation is warranted to determine whether SNORD101 exerts a direct regulatory role over these interconnected metabolic networks.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Sophia R Smith, Manik C Ghosh, Hayden Ollivierre-Wilson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Complete loss of iron regulatory proteins 1 and 2 prevents viability of murine zygotes beyond the blastocyst stage of embryonic development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood Cells Mol Dis (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bcmd.2005.12.006"}], "href": "https://doi.org/10.1016/j.bcmd.2005.12.006"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16480904"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16480904"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Shi-Jin Zhang, Marie E Sandström, Johanna T Lanner, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Activation of aconitase in mouse fast-twitch skeletal muscle during contraction-mediated oxidative stress."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Cell Physiol (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajpcell.00110.2007"}], "href": "https://doi.org/10.1152/ajpcell.00110.2007"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17615160"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17615160"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Seok-Jo Kim, Paul Cheresh, David Williams, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mitochondria-targeted Ogg1 and aconitase-2 prevent oxidant-induced mitochondrial DNA damage in alveolar epithelial cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M113.515130"}], "href": "https://doi.org/10.1074/jbc.M113.515130"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24429287"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24429287"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Jolyn Fernandes, Alexis Weddle, Caroline S Kinter, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lysine Acetylation Activates Mitochondrial Aconitase in the Heart."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochemistry (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/acs.biochem.5b00375"}], "href": "https://doi.org/10.1021/acs.biochem.5b00375"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26061789"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26061789"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Erika M Palmieri, Marieli Gonzalez-Cotto, Walter A Baseler, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Nitric oxide orchestrates metabolic rewiring in M1 macrophages by targeting aconitase 2 and pyruvate dehydrogenase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s41467-020-14433-7"}], "href": "https://doi.org/10.1038/s41467-020-14433-7"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32019928"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32019928"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Ana Izabel Silva Balbin Villaverde, Rachel A Ogle, Peter Lewis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Sialylation of Asparagine 612 Inhibits Aconitase Activity during Mouse Sperm Capacitation; a Possible Mechanism for the Switch from Oxidative Phosphorylation to Glycolysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Proteomics (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/mcp.RA120.002109"}], "href": "https://doi.org/10.1074/mcp.RA120.002109"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32839225"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32839225"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Shideh Mirhadi, Wen Zhang, Nhu-An Pham, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Mitochondrial Aconitase ACO2 Links Iron Homeostasis with Tumorigenicity in Non-Small Cell Lung Cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cancer Res (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1158/1541-7786.MCR-22-0163"}], "href": "https://doi.org/10.1158/1541-7786.MCR-22-0163"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36214668"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36214668"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Junge Zhu, Fanxi Xu, Hong Lai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "ACO2 deficiency increases vulnerability to Parkinson's disease via dysregulating mitochondrial function and histone acetylation-mediated transcription of autophagy genes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Commun Biol (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/s42003-023-05570-y"}], "href": "https://doi.org/10.1038/s42003-023-05570-y"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38007539"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38007539"}]}]}]}
Synonyms U101
NCBI Gene ID 594837
API
Download Associations
Predicted Functions View SNORD101's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD101's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD101's ARCHS4 Predicted Functions.

Functional Associations

SNORD101 has 1,405 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 10 datasets.

Click the + buttons to view associations for SNORD101 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD101 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD101 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of SNORD101 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD101 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD101 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD101 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD101 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD101 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of SNORD101 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD101 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.