| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, C/D box 105 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent investigations into mitochondrial energy metabolism and neuroactive compound synthesis have underscored the importance of enzymes with dual functionalities in the brain. For example, studies have shown that blast-induced traumatic brain injury is associated with a transient decline in neuronal ATP production that correlates with a reduction in the activity of enzymes such as glutamate oxaloacetate transaminase 2 (GOT2). In parallel, research on the kynurenine pathway has illuminated how mitochondrial aspartate aminotransferase (mAspAT)—which also functions as a kynurenine aminotransferase (KAT)—contributes to the biosynthesis of neuroactive kynurenic acid. These findings highlight key metabolic nodes in neurological function and energy homeostasis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "3"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nComplementary studies have extended these insights into disease models where mitochondrial dysfunction and enzyme regulation play pivotal roles. For instance, upregulation of GOT2 has been implicated in preserving ATP production in neurodegenerative conditions such as secondary progressive multiple sclerosis, while alterations in aspartate aminotransferase activity in macrophages emphasize its impact on inflammatory signaling. Additional work focusing on skeletal muscle metabolism in IL-6–deficient models and in C2C12 myocytes with GOT2 knockdown reinforces the idea that disturbances in mitochondrial transaminase activity can have widespread metabolic and inflammatory consequences."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "7"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nEmerging evidence also implicates small nucleolar RNAs (snoRNAs) in the modulation of these metabolic pathways. In particular, research into hepatocellular carcinoma has suggested that polymorphisms within snoRNAs may affect both their expression and the function of their host genes, with potential downstream effects on cellular metabolism. Although the direct role of SNORD105 has yet to be fully elucidated, by analogy with other snoRNAs its canonical function is likely to involve the posttranscriptional modification of ribosomal RNA. This activity may indirectly influence the translation and stability of key metabolic enzymes—such as GOT2—and thus participate in the fine-tuning of mitochondrial energy production and other critical cellular processes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Qian Han, Tao Cai, Danilo A Tagle, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Thermal stability, pH dependence and inhibition of four murine kynurenine aminotransferases."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "BMC Biochem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1186/1471-2091-11-19"}], "href": "https://doi.org/10.1186/1471-2091-11-19"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20482848"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20482848"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Qian Han, Howard Robinson, Tao Cai, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Biochemical and structural characterization of mouse mitochondrial aspartate aminotransferase, a newly identified kynurenine aminotransferase-IV."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biosci Rep (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1042/BSR20100117"}], "href": "https://doi.org/10.1042/BSR20100117"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20977429"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20977429"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Peethambaran Arun, Rania Abu-Taleb, Samuel Oguntayo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Acute mitochondrial dysfunction after blast exposure: potential role of mitochondrial glutamate oxaloacetate transaminase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurotrauma (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1089/neu.2012.2834"}], "href": "https://doi.org/10.1089/neu.2012.2834"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23600763"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23600763"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "A Chabowski, M Zmijewska, J Gorski, et al. "}, {"type": "b", "children": [{"type": "t", "text": "IL-6 deficiency increases fatty acid transporters and intramuscular lipid content in red but not white skeletal muscle."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Physiol Pharmacol (2008)"}]}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19258660"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19258660"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Josephe A Honorat, Yuji Nakatsuji, Mikito Shimizu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Febuxostat ameliorates secondary progressive experimental autoimmune encephalomyelitis by restoring mitochondrial energy production in a GOT2-dependent manner."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0187215"}], "href": "https://doi.org/10.1371/journal.pone.0187215"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29107957"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29107957"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Zhigang Zhu, Lulu Zhang, Qinghua Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Macrophage-derived sulfur dioxide is a novel inflammation regulator."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2020.02.013"}], "href": "https://doi.org/10.1016/j.bbrc.2020.02.013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32057367"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32057367"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Ritu Som, Brian D Fink, Liping Yu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Effect of the mitochondrial transaminase (GOT2) on membrane potential-sensitive respiration in mitochondria of differentiated C2C12 muscle cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Am J Physiol Cell Physiol (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/ajpcell.00576.2023"}], "href": "https://doi.org/10.1152/ajpcell.00576.2023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38646781"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38646781"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Xuekun Chen, Qing Zhang, Zhenzhen Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "An SNP reducing SNORD105 and PPAN expression decreases the risk of hepatocellular carcinoma in a Chinese population."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Lab Anal (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcla.24095"}], "href": "https://doi.org/10.1002/jcla.24095"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34741342"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34741342"}]}]}]}
|
| Synonyms | U105 |
| NCBI Gene ID | 692229 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORD105 has 1,120 functional associations with biological entities spanning 4 categories (molecular profile, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.
Click the + buttons to view associations for SNORD105 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD105 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD105 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SNORD105 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD105 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD105 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD105 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORD105 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Small Molecules | small molecule perturbations changing expression of SNORD105 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset. | |
| GTEx Tissue Gene Expression Profiles | tissues with high or low expression of SNORD105 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SNORD105 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD105 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| MotifMap Predicted Transcription Factor Targets | transcription factors regulating expression of SNORD105 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD105 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |