SNORD111 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 111
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nRecent studies have revealed that hormonal signaling via abscisic acid (ABA) and its receptor LANCL2 orchestrates key inflammatory responses in immune cells. For example, inhaled quartz stimulates murine and rat macrophages to release ABA, which acts in an autocrine manner via LANCL2 to trigger downstream signals such as Ca²⁺ influx and NFκB activation, resulting in increased inflammatory mediators like prostaglandin-E₂ and TNF-α. In addition, computational and in vivo studies of Helicobacter pylori infection show that LANCL2 critically regulates the balance between pro‐inflammatory and regulatory responses in macrophages and T cells, thereby allowing persistent bacterial colonization while protecting the epithelium from damage."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn the realm of metabolic regulation, LanC-like proteins have been examined for roles beyond their traditionally presumed catalytic functions. Although initial proposals regarding their involvement in lanthionine biosynthesis were not substantiated in knockout mouse models, further investigations have identified LANCL2 as a positive regulator of adipogenesis through its direct interaction with the nuclear receptor PPARγ, thereby supporting the transcription of key adipogenic genes. Moreover, the ABA/LANCL system has been shown to modulate mitochondrial activity and thermogenesis in both white and brown adipocytes via the AMPK/PGC-1α/Sirt1/ERRα signaling axis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "3", "end_ref": "5"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn contrast to the mechanistic insights provided by studies on the ABA/LANCL pathway, recent biomarker discovery efforts in non‐small‐cell lung cancer (NSCLC) have focused on plasma small nucleolar RNAs (snoRNAs). Among these, SNORD111 has emerged as a promising candidate for early-stage NSCLC diagnostics. Although its precise biological function remains to be fully defined, SNORD111—as with other snoRNAs—may serve as an indicator of the dysregulated cellular processes, including those related to inflammation and metabolism, that are modulated by factors such as the ABA/LANCL system."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "6"}]}, {"type": "t", "text": ""}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Mirko Magnone, Laura Sturla, Emanuela Jacchetti, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Autocrine abscisic acid plays a key role in quartz-induced macrophage activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "FASEB J (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1096/fj.11-187351"}], "href": "https://doi.org/10.1096/fj.11-187351"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22042223"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22042223"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Andrew Leber, Josep Bassaganya-Riera, Nuria Tubau-Juni, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Modeling the Role of Lanthionine Synthetase C-Like 2 (LANCL2) in the Modulation of Immune Responses to Helicobacter pylori Infection."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0167440"}], "href": "https://doi.org/10.1371/journal.pone.0167440"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27936058"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27936058"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Chang He, Min Zeng, Debapriya Dutta, et al. "}, {"type": "b", "children": [{"type": "t", "text": "LanCL proteins are not Involved in Lanthionine Synthesis in Mammals."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep40980"}], "href": "https://doi.org/10.1038/srep40980"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28106097"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28106097"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Debapriya Dutta, Kuan-Yu Lai, Adriana Reyes-Ordoñez, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Lanthionine synthetase C-like protein 2 (LanCL2) is important for adipogenic differentiation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Lipid Res (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1194/jlr.M085274"}], "href": "https://doi.org/10.1194/jlr.M085274"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29880530"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29880530"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Sonia Spinelli, Vanessa Cossu, Mario Passalacqua, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The ABA/LANCL1/2 Hormone/Receptor System Controls Adipocyte Browning and Energy Expenditure."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Int J Mol Sci (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3390/ijms24043489"}], "href": "https://doi.org/10.3390/ijms24043489"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36834900"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36834900"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Kangyu Wang, Xingguo Song, Shiwen Wang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Plasma SNORD42B and SNORD111 as potential biomarkers for early diagnosis of non-small cell lung cancer."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Lab Anal (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcla.24740"}], "href": "https://doi.org/10.1002/jcla.24740"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36284435"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36284435"}]}]}]}
Synonyms HBII-82
NCBI Gene ID 692214
API
Download Associations
Predicted Functions View SNORD111's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD111's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD111's ARCHS4 Predicted Functions.

Functional Associations

SNORD111 has 263 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 13 datasets.

Click the + buttons to view associations for SNORD111 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD111 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD111 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of SNORD111 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD111 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD111 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD111 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD111 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of SNORD111 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD111 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD111 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of SNORD111 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of SNORD111 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD111 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.