SNORD114-6 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 114-6
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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Such RNA modifications could, in theory, alter the translation efficiency or splicing of mRNAs for proteins controlling proliferation, differentiation, and tumor suppression—as thoroughly illustrated by the complex roles of Rb in these settings."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nRecent work in diverse model systems further demonstrates that disruption of Rb function leads not only to uncontrolled cell-cycle reentry and a failure of terminal differentiation but also to altered chromatin states and epigenetic reprogramming. This reprogramming, seen in contexts of lineage plasticity, metabolic stress, and DNA damage responses (as well as in the maintenance of heterochromatin at repetitive elements), underpins critical processes in tumor progression and tissue regeneration. In these studies, aberrations in cell cycle proteins, transcription factors, and chromatin remodeling enzymes come together to produce a landscape of deregulated gene expression. SNORD114-6 might influence such reprogramming events, for example by affecting the modification of ribosomal or noncoding RNAs that participate in the assembly of chromatin regulatory complexes or by modulating the translation of proteins that interface with the Rb-E2F pathway."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "6", "end_ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nCollectively, while the studies provided do not address SNORD114-6 explicitly, the molecular scenarios they describe—ranging from deregulated proliferation in cancers to failures in differentiation during normal development—suggest that SNORD114-6, if functionally linked to these processes, would likely operate as a modulator of RNA modification. By directing site‐specific 2′-O-methylation events, SNORD114-6 could influence the stability and translation of mRNAs or noncoding RNAs that regulate Rb pathway activity, thereby contributing indirectly to cell cycle control, chromatin structure maintenance, and tumor suppression. Further dedicated studies are needed to clarify whether and how SNORD114-6 might intersect with these critical Rb-dependent regulatory networks."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "13", "end_ref": "31"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Lizhao Wu, Alain de Bruin, Harold I Saavedra, et al. 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Synonyms 14Q(II-6)
NCBI Gene ID 767582
API
Download Associations
Predicted Functions View SNORD114-6's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD114-6's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD114-6's ARCHS4 Predicted Functions.

Functional Associations

SNORD114-6 has 231 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.

Click the + buttons to view associations for SNORD114-6 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD114-6 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD114-6 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD114-6 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD114-6 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD114-6 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of SNORD114-6 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD114-6 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD114-6 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of SNORD114-6 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MotifMap Predicted Transcription Factor Targets transcription factors regulating expression of SNORD114-6 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD114-6 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.