|HGNC Family||Non-coding RNAs|
|Name||small nucleolar RNA, C/D box 115-1|
|Description||This gene encodes a small nucleolar RNA (snoRNA) that is found clustered with dozens of other similar snoRNAs on chromosome 15. These genes are found mostly within introns of the IC-SNURF-SNRPN transcript, which is paternally imprinted and from the Prader-Willi/Angelman syndrome (PWS) region. This gene has been designated as copy 1 of the cluster and may be involved in the regulation of RNA editing and/or alternative splicing of the serotonin receptor 2C (HTR2C) transcript. This gene is not thought to play a major role in PWS. [provided by RefSeq, Jul 2008]|
|NCBI Gene ID||338433|
|Expression in Tissues and Cell Lines||
SNORD115-1 has 207 functional associations with biological entities spanning 4 categories (molecular profile, functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 8 datasets.
Click the + buttons to view associations for SNORD115-1 from the datasets below.
If available, associations are ranked by standardized value
|CCLE Cell Line Gene CNV Profiles||cell lines with high or low copy number of SNORD115-1 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.|
|COSMIC Cell Line Gene CNV Profiles||cell lines with high or low copy number of SNORD115-1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.|
|ENCODE Histone Modification Site Profiles||histone modification site profiles with high histone modification abundance at SNORD115-1 gene from the ENCODE Histone Modification Site Profiles dataset.|
|ENCODE Transcription Factor Binding Site Profiles||transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-1 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.|
|ENCODE Transcription Factor Targets||transcription factors binding the promoter of SNORD115-1 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.|
|GeneRIF Biological Term Annotations||biological terms co-occuring with SNORD115-1 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.|
|JASPAR Predicted Transcription Factor Targets||transcription factors regulating expression of SNORD115-1 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.|
|Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles||cell lines with high or low copy number of SNORD115-1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.|