SNORD115-11 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 115-11
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nSNORD115-11 is a member of the small nucleolar RNA family that—although classically associated with the modification and processing of ribosomal RNAs—has recently come under scrutiny as a potential regulator of cellular pathways that govern cytoskeletal dynamics and cell motility. Insights into these processes have been provided by work delineating the spatiotemporal regulation of the Rho family of small GTPases: for example, studies have shown that RhoA is activated synchronously with membrane protrusion while related GTPases such as Rac1 and Cdc42 act with defined delays behind the leading edge, thus orchestrating protrusion and adhesion during cell migration."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurther molecular and cellular investigations have revealed that RhoA and its downstream effectors—notably the Rho-associated kinase (ROCK)—play pivotal roles in diverse biological contexts, ranging from epithelial–mesenchymal transitions and neurite outgrowth regulation to neural tube closure and chondrogenesis. Through tightly controlled cycles of activation and inactivation, RhoA signaling enables the reorganization of actomyosin filaments that underlie changes in cell shape, enhance focal adhesion dynamics, and mediate cellular responses to growth factors and inflammatory cytokines."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "3", "end_ref": "8"}]}, {"type": "t", "text": " These studies underscore the concept that, by precisely timing and spatially restricting the activity of RhoA, cells can coordinate the initiation, reinforcement, and stabilization of migratory protrusions.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn pathological contexts such as cancer metastasis, vascular hyperresponsiveness, and defective neural development, aberrant RhoA/ROCK signaling is a key determinant of disease phenotypes. Dysregulated activation of RhoA has been linked to epithelial cell invasion, alterations in smooth muscle contractility, and defective barrier restoration via impaired phosphorylation cascades and cytoskeletal remodeling."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "9", "end_ref": "16"}]}, {"type": "t", "text": " Given that SNORD115-11 is emerging as an unconventional regulatory RNA, it is now hypothesized that it might modulate such signaling events—perhaps by influencing the expression, splicing, or post‐transcriptional modification of key mRNAs involved in the RhoA/ROCK pathway. This possibility gains further weight in light of reports identifying roles for similar noncoding RNAs in fine-tuning signal transduction and cellular responsiveness."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "17", "end_ref": "20"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nMoreover, the broader landscape of cellular responses—from the maintenance of tissue architecture and neuronal positioning to the orchestration of stress responses and repair mechanisms—has been shown to critically depend on balanced RhoA activity. In pathological settings, dysregulation of this balance results in invasive behavior, defective barrier function, or exaggerated inflammatory responses."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "21", "end_ref": "24"}]}, {"type": "t", "text": " In this context, SNORD115-11 may serve as a modulator that integrates mechanical and metabolic inputs to adjust RhoA signaling outputs, thereby indirectly influencing processes such as neuronal plasticity, vascular permeability, and cellular differentiation.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Matthias Machacek, Louis Hodgson, Christopher Welch, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Melatonin attenuates choroidal neovascularization by regulating macrophage/microglia polarization via inhibition of RhoA/ROCK signaling pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Pineal Res (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/jpi.12660"}], "href": "https://doi.org/10.1111/jpi.12660"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32323368"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32323368"}]}]}]}
Synonyms HBII-52-11
NCBI Gene ID 100033448
API
Download Associations
Predicted Functions View SNORD115-11's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD115-11's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD115-11's ARCHS4 Predicted Functions.

Functional Associations

SNORD115-11 has 173 functional associations with biological entities spanning 4 categories (molecular profile, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for SNORD115-11 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-11 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-11 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
CTD Gene-Chemical Interactions chemicals interacting with SNORD115-11 gene/protein from the curated CTD Gene-Chemical Interactions dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD115-11 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-11 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD115-11 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD115-11 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-11 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD115-11 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.