SNORD115-17 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 115-17
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe current body of work rigorously characterizes the platelet glycoprotein Ib‐IX‐V complex as an essential receptor for von Willebrand factor, mediating platelet adhesion, activation, and aggregation. In one study, the endoplasmic reticulum chaperone gp96 (also known as grp94/HSP90b1) was found to be indispensable for proper assembly of this complex through its selective binding to the GPIX subunit—a discovery that has shed new light on the molecular basis of Bernard‐Soulier syndrome and related thrombocytopenias."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional investigations in both infectious and inflammatory settings have demonstrated that disruptions or modifications of the GPIb-IX complex can significantly impact platelet function. For instance, in models of sepsis and endotoxemia, the receptor has been implicated in mediating platelet adhesion to damaged endothelium, thereby contributing to intravascular inflammation, microvascular thrombosis, and thrombocytopenia."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "3"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nInterestingly, none of the studies summarized above include or reference SNORD115-17. SNORD115-17 is a small nucleolar RNA typically associated with the post‐transcriptional modification and processing of RNA transcripts. Its established functions—such as modulating alternative splicing events (for example, in other contexts like the regulation of serotonin receptor 2C pre-mRNA)—are not connected to the molecular assembly, signaling, or functional roles of the GPIb-IX-V complex described in these investigations."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "5"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Matthew Staron, Shuang Wu, Feng Hong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Heat-shock protein gp96/grp94 is an essential chaperone for the platelet glycoprotein Ib-IX-V complex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2011-01-330464"}], "href": "https://doi.org/10.1182/blood-2011-01-330464"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21576699"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21576699"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Catherine Strassel, Anita Eckly, Catherine Léon, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Intrinsic impaired proplatelet formation and microtubule coil assembly of megakaryocytes in a mouse model of Bernard-Soulier syndrome."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Haematologica (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.3324/haematol.2008.001032"}], "href": "https://doi.org/10.3324/haematol.2008.001032"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19377075"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19377075"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Adam Corken, Susan Russell, Judith Dent, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Platelet glycoprotein Ib-IX as a regulator of systemic inflammation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arterioscler Thromb Vasc Biol (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/ATVBAHA.113.303113"}], "href": "https://doi.org/10.1161/ATVBAHA.113.303113"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24504734"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24504734"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Hong Yin, Aleksandra Stojanovic-Terpo, Weidong Xu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role for platelet glycoprotein Ib-IX and effects of its inhibition in endotoxemia-induced thrombosis, thrombocytopenia, and mortality."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arterioscler Thromb Vasc Biol (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/ATVBAHA.113.302339"}], "href": "https://doi.org/10.1161/ATVBAHA.113.302339"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24051142"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24051142"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "M Keegan Delaney, Junling Liu, Yi Zheng, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The role of Rac1 in glycoprotein Ib-IX-mediated signal transduction and integrin activation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arterioscler Thromb Vasc Biol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/ATVBAHA.112.254920"}], "href": "https://doi.org/10.1161/ATVBAHA.112.254920"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22995516"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22995516"}]}]}]}
Synonyms HBII-52-17
NCBI Gene ID 100033455
API
Download Associations
Predicted Functions View SNORD115-17's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD115-17's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD115-17's ARCHS4 Predicted Functions.

Functional Associations

SNORD115-17 has 172 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for SNORD115-17 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-17 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-17 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD115-17 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-17 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD115-17 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD115-17 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-17 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of SNORD115-17 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD115-17 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.