| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, C/D box 115-19 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe study detailed in the abstract"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "underscores the essential role of the eIF3m subunit in maintaining the structural integrity of the mammalian eIF3 complex and, consequently, efficient translation initiation during embryonic development and adult homeostasis. Although the research primarily focuses on the functions of eIF3m—demonstrating that its absence leads to severe developmental defects and compromised protein biosynthesis—the abstract does not provide any data or discussion regarding the functions of SNORD115-19.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAs SNORD115-19 is a small nucleolar RNA typically implicated in the modification of other RNA molecules, such as guiding 2′-O-methylation, its role might be considered in other contexts of RNA processing or post-transcriptional regulation. However, within the framework of the provided study and its emphasis on translation initiation factor dynamics, there is no evidence or suggestion linking SNORD115-19 to the described molecular mechanisms or developmental phenotypes."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the abstract presents a comprehensive analysis of eIF3m’s critical involvement in translation and development, it does not address any functional aspects or potential regulatory roles for SNORD115-19. Clarification of SNORD115-19’s function, if any, in translation regulation or other cellular processes awaits further investigation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Liyong Zeng, Yihan Wan, Dan Li, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The m subunit of murine translation initiation factor eIF3 maintains the integrity of the eIF3 complex and is required for embryonic development, homeostasis, and organ size control."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M113.506147"}], "href": "https://doi.org/10.1074/jbc.M113.506147"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24003236"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24003236"}]}]}]}
|
| Synonyms | HBII-52-19 |
| NCBI Gene ID | 100033458 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORD115-19 has 171 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for SNORD115-19 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-19 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-19 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-19 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORD115-19 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SNORD115-19 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-19 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-19 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |