| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, C/D box 115-21 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nA review of the provided abstracts reveals an extensive body of work centered on the roles of antioxidant enzymes—most notably the various glutathione peroxidase (GPx) isoforms—and other redox‐regulatory proteins in mitigating reactive oxygen species (ROS)–mediated damage. These studies examine how alterations in antioxidant capacity (via gene knockout, overexpression, or pharmacological manipulation) influence cell survival, inflammatory signaling, metabolic homeostasis, and tissue injury across multiple systems including the gastrointestinal tract, cardiovascular system, liver, kidney, brain, and immune cells. Notably, though these abstracts offer deep insights into oxidative stress and its pathological sequelae, none provide direct commentary on the function of SNORD115-21."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "10"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn contrast to the detailed dissection of oxidative and redox signaling pathways presented in these reports—which explore mechanisms governing apoptosis, proliferation, endothelial and neuronal function, inflammatory cascades, and the metabolic consequences of impaired ROS detoxification—the literature here does not address small nucleolar RNAs such as SNORD115-21. In general, SNORD115-21 (a member of the SNORD115 family) is known from other studies to be involved in post‐transcriptional modification and alternative splicing regulation (for example, affecting the serotonin receptor 2C pre-mRNA), but its role in antioxidant defense or modulation of oxidative stress remains uncharacterized in the current collection of studies."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "11", "end_ref": "26"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOverall, while these studies collectively underscore the critical importance of balanced antioxidant defenses in preventing oxidative tissue injury and regulating multiple pathophysiological processes, they leave open the question of whether noncoding RNAs—such as SNORD115-21—might contribute to the regulation of such pathways. Future investigations could profitably explore if SNORD115-21 exerts any modulatory effects on the expression, splicing, or function of antioxidant enzymes (or other redox‐sensitive factors), thereby bridging the gap between small nucleolar RNA–mediated RNA processing and the cellular response to oxidative stress."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "27", "end_ref": "49"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Fong-Fong Chu, R Steven Esworthy, Peiguo G Chu, et al. 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| Synonyms | HBII-52-21 |
| NCBI Gene ID | 100033603 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORD115-21 has 200 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.
Click the + buttons to view associations for SNORD115-21 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-21 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| ChEA Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-21 gene from the CHEA Transcription Factor Binding Site Profiles dataset. | |
| ChEA Transcription Factor Targets | transcription factors binding the promoter of SNORD115-21 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-21 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-21 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORD115-21 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of SNORD115-21 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SNORD115-21 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-21 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of SNORD115-21 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-21 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |