| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, C/D box 115-22 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe abstracts provided center on key aspects of intracellular protein trafficking and neuronal differentiation—specifically the roles of COPII components (SAR1A/B) in mediating ER-to-Golgi transport and the regulated, layer‐specific nuclear localization of SARA during brain development."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": " Notably, neither study addresses SNORD115-22 directly, and no experimental evidence is offered linking this small nucleolar RNA to the secretory pathway or SARA’s function.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nSNORD115-22 belongs to the SNORD115 family of snoRNAs, which are traditionally implicated in guiding chemical modifications of RNA and influencing alternative splicing of target transcripts (for example, the serotonin receptor 2C pre-mRNA). However, the focus of the presented abstracts on SAR1 paralogs and endosomal proteins leaves the contribution, if any, of SNORD115-22 to these cellular processes unexamined."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while small nucleolar RNAs such as SNORD115-22 are generally understood to modulate RNA processing and gene expression, the abstracts in question do not report any functional data concerning SNORD115-22. Further dedicated studies would be necessary to elucidate whether SNORD115-22 intersects with the intracellular trafficking or neuronal regulatory mechanisms highlighted in these reports."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Vi T Tang, Jie Xiang, Zhimin Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Functional overlap between the mammalian "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "Sar1a"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " and "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "Sar1b"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " paralogs in vivo."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.2322164121"}], "href": "https://doi.org/10.1073/pnas.2322164121"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38687799"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38687799"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Ivan Mestres, Maximilian Einsiedel, June Möller, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Smad anchor for receptor activation nuclear localization during development identifies Layers V and VI of the neocortex."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Comp Neurol (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/cne.24881"}], "href": "https://doi.org/10.1002/cne.24881"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32037591"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32037591"}]}]}]}
|
| Synonyms | HBII-52-22 |
| NCBI Gene ID | 100033799 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORD115-22 has 196 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 7 datasets.
Click the + buttons to view associations for SNORD115-22 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-22 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-22 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-22 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-22 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORD115-22 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-22 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-22 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |