SNORD115-35 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 115-35
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe recent study"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "primarily investigated how lipopolysaccharide‐induced sepsis triggers oxidative stress leading to site‐specific tyrosine nitration and consequent inactivation of carboxypeptidase B1 (CPB1). Although SNORD115-35 was not directly examined in the context of this investigation, its inclusion in the broader set of scientific abstracts suggests an interest in small nucleolar RNAs that typically function as guide RNAs for modifying or processing other RNAs. Members of the SNORD115 family have been implicated in the modulation of pre-mRNA splicing and may influence the expression of key proteins under stress conditions. In this framework, SNORD115-35 might be hypothesized to play a regulatory role—possibly affecting the transcript processing of genes involved in inflammatory or oxidative stress responses, thereby indirectly interfacing with pathways such as those controlling CPB1 oxidization and nitration as described in the study.\n \nWhile the study"}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": "did not address SNORD115-35 explicitly, its detailed dissection of enzyme modifications in sepsis highlights a cellular environment in which post-transcriptional regulators, including specific snoRNAs like SNORD115-35, could have critical functions. In scenarios of systemic inflammation, such non-coding RNAs may modulate the maturation or alternative splicing of pre-mRNAs encoding proteins that participate in reactive oxygen and nitrogen species production, protein nitration, or other stress response pathways. By fine-tuning these processes, SNORD115-35 could help maintain cellular homeostasis during inflammatory insults, warranting further experimental investigation into its precise targets and regulatory mechanisms.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Saurabh Chatterjee, Olivier Lardinois, Marcelo G Bonini, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Site-specific carboxypeptidase B1 tyrosine nitration and pathophysiological implications following its physical association with nitric oxide synthase-3 in experimental sepsis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.0900593"}], "href": "https://doi.org/10.4049/jimmunol.0900593"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19717511"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19717511"}]}]}]}
Synonyms HBII-52-35
NCBI Gene ID 100033809
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Predicted Functions View SNORD115-35's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD115-35's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD115-35's ARCHS4 Predicted Functions.

Functional Associations

SNORD115-35 has 174 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.

Click the + buttons to view associations for SNORD115-35 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-35 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-35 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD115-35 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-35 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD115-35 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of SNORD115-35 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD115-35 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-35 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD115-35 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.