| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, C/D box 115-38 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nAlthough none of the provided abstracts mention SNORD115‑38, the collective body of work instead outlines the diverse functions of P‐Rex1 (phosphatidylinositol‑3,4,5‑trisphosphate‑dependent Rac exchange factor 1). In cancer models, P‑Rex1 operates as a key modulator of Rac1 signaling to control actin cytoskeletal reorganization, cell migration, and invasion. In PIK3CA mutant and HER2‐amplified breast cancers, for example, P‑Rex1 functions downstream of PI3K to regulate not only the canonical AKT pathway but also a Rac1/ERK cascade that governs apoptosis and therapeutic sensitivity."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn parallel, multiple studies underscore the essential role of P‑Rex1 in immune regulation. In neutrophils and other leukocytes, P‑Rex1 mediates guanine nucleotide exchange on Rac GTPases in response to chemoattractants and GPCR signals, thereby promoting proper integrin activation, adhesion, chemotaxis, and reactive oxygen species (ROS) production. These studies reveal that P‑Rex1’s coordinated regulation of Rac1 and Rac2 is crucial for processes such as slow leukocyte rolling and transmigration during inflammation."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional roles for P‑Rex1 have been identified in non‐immune contexts. In adipocytes, for instance, P‑Rex1 facilitates PI3K‑dependent membrane ruffling that contributes to GLUT4 trafficking at submaximal insulin concentrations, linking cytoskeletal dynamics to metabolic regulation."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "13"}]}, {"type": "t", "text": " Moreover, aberrant P‑Rex1 signaling has been implicated in neurodevelopmental disorders, as genetic variations affecting its function in the hippocampus lead to deficits in synaptic plasticity and behaviors reminiscent of autism."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "15"}]}, {"type": "t", "text": " Finally, studies in lung and cardiac models indicate that P‑Rex1 contributes to pathological remodeling such as pulmonary and cardiac fibrosis."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "17"}]}, {"type": "t", "text": "\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Colin R Lindsay, Samuel Lawn, Andrew D Campbell, et al. "}, {"type": "b", "children": [{"type": "t", "text": "P-Rex1 is required for efficient melanoblast migration and melanoma metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms1560"}], "href": "https://doi.org/10.1038/ncomms1560"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22109529"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22109529"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Hiromichi Ebi, Carlotta Costa, Anthony C Faber, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PI3K regulates MEK/ERK signaling in breast cancer via the Rac-GEF, P-Rex1."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1314124110"}], "href": "https://doi.org/10.1073/pnas.1314124110"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24327733"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24327733"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Hadir Marei, Alejandro Carpy, Anna Woroniuk, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential Rac1 signalling by guanine nucleotide exchange factors implicates FLII in regulating Rac1-driven cell migration."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms10664"}], "href": "https://doi.org/10.1038/ncomms10664"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26887924"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26887924"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Nuthasuda Srijakotre, Heng-Jia Liu, Max Nobis, et al. "}, {"type": "b", "children": [{"type": "t", "text": "PtdIns(3,4,5)P"}, {"type": "a", "children": [{"type": "t", "text": "sub"}], "href": "sub"}, {"type": "t", "text": "3"}, {"type": "a", "children": [{"type": "t", "text": "/sub"}], "href": "/sub"}, {"type": "t", "text": "-dependent Rac exchanger 1 (P-Rex1) promotes mammary tumor initiation and metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.2006445117"}], "href": "https://doi.org/10.1073/pnas.2006445117"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "33097662"}], "href": "https://pubmed.ncbi.nlm.nih.gov/33097662"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Heidi C E Welch, Alison M Condliffe, Laura J Milne, et al. "}, {"type": "b", "children": [{"type": "t", "text": "P-Rex1 regulates neutrophil function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Biol (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cub.2005.09.050"}], "href": "https://doi.org/10.1016/j.cub.2005.09.050"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16243035"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16243035"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Xuemei Dong, Zhicheng Mo, Gary Bokoch, et al. "}, {"type": "b", "children": [{"type": "t", "text": "P-Rex1 is a primary Rac2 guanine nucleotide exchange factor in mouse neutrophils."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Curr Biol (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.cub.2005.09.014"}], "href": "https://doi.org/10.1016/j.cub.2005.09.014"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16243036"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16243036"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Campbell D Lawson, Sarah Donald, Karen E Anderson, et al. "}, {"type": "b", "children": [{"type": "t", "text": "P-Rex1 and Vav1 cooperate in the regulation of formyl-methionyl-leucyl-phenylalanine-dependent neutrophil responses."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.1002738"}], "href": "https://doi.org/10.4049/jimmunol.1002738"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21178006"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21178006"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Feng Qian, Guy C Le Breton, Jia Chen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Role for the guanine nucleotide exchange factor phosphatidylinositol-3,4,5-trisphosphate-dependent rac exchanger 1 in platelet secretion and aggregation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Arterioscler Thromb Vasc Biol (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/ATVBAHA.111.243675"}], "href": "https://doi.org/10.1161/ATVBAHA.111.243675"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22207728"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22207728"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Ram P Naikawadi, Ni Cheng, Stephen M Vogel, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A critical role for phosphatidylinositol (3,4,5)-trisphosphate-dependent Rac exchanger 1 in endothelial junction disruption and vascular hyperpermeability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Circ Res (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1161/CIRCRESAHA.112.273078"}], "href": "https://doi.org/10.1161/CIRCRESAHA.112.273078"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22965143"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22965143"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Jan M Herter, Jan Rossaint, Helena Block, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Integrin activation by P-Rex1 is required for selectin-mediated slow leukocyte rolling and intravascular crawling."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2012-09-457085"}], "href": "https://doi.org/10.1182/blood-2012-09-457085"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23343834"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23343834"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "George Damoulakis, Laure Gambardella, Kent L Rossman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "P-Rex1 directly activates RhoG to regulate GPCR-driven Rac signalling and actin polarity in neutrophils."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Sci (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1242/jcs.153049"}], "href": "https://doi.org/10.1242/jcs.153049"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24659802"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24659802"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Dingxin Pan, Richard T Amison, Yanira Riffo-Vasquez, et al. "}, {"type": "b", "children": [{"type": "t", "text": "P-Rex and Vav Rac-GEFs in platelets control leukocyte recruitment to sites of inflammation."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Blood (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1182/blood-2014-07-591040"}], "href": "https://doi.org/10.1182/blood-2014-07-591040"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25538043"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25538043"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Claire Jackson, Heidi C Welch, Tomas C Bellamy "}, {"type": "b", "children": [{"type": "t", "text": "Control of cerebellar long-term potentiation by P-Rex-family guanine-nucleotide exchange factors and phosphoinositide 3-kinase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0011962"}], "href": "https://doi.org/10.1371/journal.pone.0011962"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20694145"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20694145"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Demis Balamatsias, Anne M Kong, Joanne E Waters, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Pharmacological Inhibition of P-Rex1/Rac1 Axis Blocked Angiotensin II-Induced Cardiac Fibrosis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cardiovasc Drugs Ther (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s10557-023-07442-3"}], "href": "https://doi.org/10.1007/s10557-023-07442-3"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36892683"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36892683"}]}]}]}
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| Synonyms | HBII-52-38 |
| NCBI Gene ID | 100033812 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORD115-38 has 165 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 9 datasets.
Click the + buttons to view associations for SNORD115-38 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-38 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-38 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-38 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-38 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORD115-38 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of SNORD115-38 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-38 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of SNORD115-38 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-38 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |