| HGNC Family | Non-coding RNAs |
| Name | small nucleolar RNA, C/D box 115-4 |
| Description | Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025] |
| Summary |
{"type": "root", "children": [{"type": "p", "children": [{"type": "t", "text": "\nThe body of work represented by these abstracts primarily investigates how mTORC1 signaling and its downstream translational repressors—especially the eIF4E‐binding proteins (4E‐BPs, notably 4E‐BP1 and 4E‐BP2)—control key cellular processes such as proliferation, metabolism, synaptic plasticity, and responses to stress in diverse tissues including brain, liver, muscle, immune cells, and adipose tissue."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "24"}]}, {"type": "t", "text": " In these studies, modulation of cap‐dependent mRNA translation via changes in 4E‐BP phosphorylation, binding to translation initiation factors, and interactions with other pathway components is demonstrated to impact fundamental processes ranging from synaptic transmission and memory formation to metabolic homeostasis and inflammatory responses.\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nNotably, within the scope of these abstracts there is no mention or investigation of SNORD115-4. Although SNORD115 family small nucleolar RNAs have been implicated in the regulation of alternative splicing and post‐transcriptional modifications—such as modulating the editing and processing of specific neuronal transcripts (for example, those affecting serotonin receptor function)—none of the studies provided address any functional role, mechanism, or biomedical impact of SNORD115-4. Consequently, while the literature summarized here offers rich insights into mTORC1-mediated translational control, further dedicated research is required to elucidate the potential roles of SNORD115-4 in cellular and neurobiological contexts.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Jessica L Banko, Francis Poulin, Lingfei Hou, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The translation repressor 4E-BP2 is critical for eIF4F complex formation, synaptic plasticity, and memory in the hippocampus."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.2423-05.2005"}], "href": "https://doi.org/10.1523/JNEUROSCI.2423-05.2005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16237163"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16237163"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Jessica L Banko, Maayan Merhav, Elad Stern, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Behavioral alterations in mice lacking the translation repressor 4E-BP2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Learn Mem (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.nlm.2006.08.012"}], "href": "https://doi.org/10.1016/j.nlm.2006.08.012"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17029989"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17029989"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Olivier Le Bacquer, Emmanuel Petroulakis, Sabina Paglialunga, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Elevated sensitivity to diet-induced obesity and insulin resistance in mice lacking 4E-BP1 and 4E-BP2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Clin Invest (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1172/JCI29528"}], "href": "https://doi.org/10.1172/JCI29528"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17273556"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17273556"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Katie E Olson, Garrett C Booth, Francis Poulin, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Impaired myelopoiesis in mice lacking the repressors of translation initiation, 4E-BP1 and 4E-BP2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Immunology (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1365-2567.2008.02981.x"}], "href": "https://doi.org/10.1111/j.1365-2567.2008.02981.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19175792"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19175792"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "L J Coleman, M B Peter, T J Teall, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Combined analysis of eIF4E and 4E-binding protein expression predicts breast cancer survival and estimates eIF4E activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Br J Cancer (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/sj.bjc.6605044"}], "href": "https://doi.org/10.1038/sj.bjc.6605044"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19367274"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19367274"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Michael Bidinosti, Israeli Ran, Maria R Sanchez-Carbente, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Postnatal deamidation of 4E-BP2 in brain enhances its association with raptor and alters kinetics of excitatory synaptic transmission."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2010.02.022"}], "href": "https://doi.org/10.1016/j.molcel.2010.02.022"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20347422"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20347422"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Michael Bidinosti, Yvan Martineau, Filipp Frank, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Repair of isoaspartate formation modulates the interaction of deamidated 4E-BP2 with mTORC1 in brain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M110.120774"}], "href": "https://doi.org/10.1074/jbc.M110.120774"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20424163"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20424163"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Ryan J O Dowling, Ivan Topisirovic, Tommy Alain, et al. "}, {"type": "b", "children": [{"type": "t", "text": "mTORC1-mediated cell proliferation, but not cell growth, controlled by the 4E-BPs."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Science (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/science.1187532"}], "href": "https://doi.org/10.1126/science.1187532"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20508131"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20508131"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Michael D Dennis, Scot R Kimball, Leonard S Jefferson "}, {"type": "b", "children": [{"type": "t", "text": "Mechanistic target of rapamycin complex 1 (mTORC1)-mediated phosphorylation is governed by competition between substrates for interaction with raptor."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M112.402461"}], "href": "https://doi.org/10.1074/jbc.M112.402461"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23184952"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23184952"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Israeli Ran, Christos G Gkogkas, Cristina Vasuta, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Selective regulation of GluA subunit synthesis and AMPA receptor-mediated synaptic function and plasticity by the translation repressor 4E-BP2 in hippocampal pyramidal cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.3264-12.2013"}], "href": "https://doi.org/10.1523/JNEUROSCI.3264-12.2013"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23365227"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23365227"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Jennifer L Steiner, Anne M Pruznak, Gina Deiter, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Disruption of genes encoding eIF4E binding proteins-1 and -2 does not alter basal or sepsis-induced changes in skeletal muscle protein synthesis in male or female mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0099582"}], "href": "https://doi.org/10.1371/journal.pone.0099582"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24945486"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24945486"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Maneet Singh, Yu-Kyong Shin, Xiaoqing Yang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "4E-BPs Control Fat Storage by Regulating the Expression of Egr1 and ATGL."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M114.631895"}], "href": "https://doi.org/10.1074/jbc.M114.631895"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25814662"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25814662"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Jacky Chung, Daniel E Bauer, Alireza Ghamari, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The mTORC1/4E-BP pathway coordinates hemoglobin production with L-leucine availability."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Signal (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/scisignal.aaa5903"}], "href": "https://doi.org/10.1126/scisignal.aaa5903"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25872869"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25872869"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "Manuel Blandino-Rosano, Joshua O Scheys, Margarita Jimenez-Palomares, et al. "}, {"type": "b", "children": [{"type": "t", "text": "4E-BP2/SH2B1/IRS2 Are Part of a Novel Feedback Loop That Controls β-Cell Mass."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Diabetes (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.2337/db15-1443"}], "href": "https://doi.org/10.2337/db15-1443"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27217487"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27217487"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Tiffany V Lin, Lawrence Hsieh, Tomoki Kimura, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Normalizing translation through 4E-BP prevents mTOR-driven cortical mislamination and ameliorates aberrant neuron integration."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1605740113"}], "href": "https://doi.org/10.1073/pnas.1605740113"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27647922"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27647922"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Olivier Le Bacquer, Kristell Combe, Christophe Montaurier, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Muscle metabolic alterations induced by genetic ablation of 4E-BP1 and 4E-BP2 in response to diet-induced obesity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Nutr Food Res (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/mnfr.201700128"}], "href": "https://doi.org/10.1002/mnfr.201700128"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28544394"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28544394"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Mirtha William, Louis-Philippe Leroux, Visnu Chaparro, et al. "}, {"type": "b", "children": [{"type": "t", "text": "eIF4E-Binding Proteins 1 and 2 Limit Macrophage Anti-Inflammatory Responses through Translational Repression of IL-10 and Cyclooxygenase-2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Immunol (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.4049/jimmunol.1701670"}], "href": "https://doi.org/10.4049/jimmunol.1701670"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "29712774"}], "href": "https://pubmed.ncbi.nlm.nih.gov/29712774"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Olivier Le Bacquer, Kristell Combe, Véronique Patrac, et al. "}, {"type": "b", "children": [{"type": "t", "text": "4E-BP1 and 4E-BP2 double knockout mice are protected from aging-associated sarcopenia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cachexia Sarcopenia Muscle (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1002/jcsm.12412"}], "href": "https://doi.org/10.1002/jcsm.12412"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30927336"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30927336"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Shane Wiebe, Anmol Nagpal, Vinh T Truong, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Inhibitory interneurons mediate autism-associated behaviors via 4E-BP2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1908126116"}], "href": "https://doi.org/10.1073/pnas.1908126116"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31427534"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31427534"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Stella Kouloulia, Erik I Hallin, Konstanze Simbriger, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Raptor-Mediated Proteasomal Degradation of Deamidated 4E-BP2 Regulates Postnatal Neuronal Translation and NF-κB Activity."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Rep (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.celrep.2019.11.023"}], "href": "https://doi.org/10.1016/j.celrep.2019.11.023"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31825840"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31825840"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Vijendra Sharma, Rapita Sood, Danning Lou, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Loss of 4E-BPs prevents the hindlimb immobilization-induced decrease in protein synthesis in skeletal muscle."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Appl Physiol (1985) (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1152/japplphysiol.00563.2022"}], "href": "https://doi.org/10.1152/japplphysiol.00563.2022"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "36454675"}], "href": "https://pubmed.ncbi.nlm.nih.gov/36454675"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Xiao Han, Fei Yang, Zhengyi Zhang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "4EBP2-regulated protein translation has a critical role in high-fat diet-induced insulin resistance in hepatocytes."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2023)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.jbc.2023.105315"}], "href": "https://doi.org/10.1016/j.jbc.2023.105315"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "37797700"}], "href": "https://pubmed.ncbi.nlm.nih.gov/37797700"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Ziying Huang, Shane Wiebe, Anmol Nagpal, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Dysregulating mTORC1-4E-BP2 signaling in GABAergic interneurons impairs hippocampus-dependent learning and memory."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Learn Mem (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1101/lm.054018.124"}], "href": "https://doi.org/10.1101/lm.054018.124"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "39467641"}], "href": "https://pubmed.ncbi.nlm.nih.gov/39467641"}]}]}]}
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| Synonyms | HBII-52-4 |
| NCBI Gene ID | 100033441 |
| API | |
| Download Associations | |
| Predicted Functions |
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| Co-expressed Genes |
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| Expression in Tissues and Cell Lines |
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SNORD115-4 has 174 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.
Click the + buttons to view associations for SNORD115-4 from the datasets below.
If available, associations are ranked by standardized value
| Dataset | Summary | |
|---|---|---|
| CCLE Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-4 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset. | |
| COSMIC Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-4 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset. | |
| ENCODE Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-4 gene from the ENCODE Histone Modification Site Profiles dataset. | |
| ENCODE Transcription Factor Binding Site Profiles | transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-4 gene from the ENCODE Transcription Factor Binding Site Profiles dataset. | |
| ENCODE Transcription Factor Targets | transcription factors binding the promoter of SNORD115-4 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset. | |
| GEO Signatures of Differentially Expressed Genes for Gene Perturbations | gene perturbations changing expression of SNORD115-4 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset. | |
| GEO Signatures of Differentially Expressed Genes for Kinase Perturbations | kinase perturbations changing expression of SNORD115-4 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset. | |
| JASPAR Predicted Transcription Factor Targets | transcription factors regulating expression of SNORD115-4 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset. | |
| Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles | cell lines with high or low copy number of SNORD115-4 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset. | |
| KnockTF Gene Expression Profiles with Transcription Factor Perturbations | transcription factor perturbations changing expression of SNORD115-4 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset. | |
| Roadmap Epigenomics Histone Modification Site Profiles | histone modification site profiles with high histone modification abundance at SNORD115-4 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset. | |