SNORD115-48 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 115-48
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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These studies demonstrate that RGS9‐2 is highly enriched in neural tissues such as the striatum and retina, where it modulates dopamine and opioid receptor responses as well as phototransduction kinetics, contributing to the regulation of motor control, reward, sensory processing, and adaptation to chronic drug exposure."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "12"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional investigations detailed in these abstracts extend the functional impact of RGS9‐2 to the regulation of downstream signaling events and cellular plasticity. These include modulations of receptor internalization, alterations in G protein–effector interactions, posttranslational control through phosphorylation and membrane targeting, as well as contributions to behavioral phenotypes such as analgesia, dyskinesia, and even metabolic effects. Furthermore, several studies document that changes in the expression or the stability of RGS9‐2—and its anchoring partners—are associated with adaptations in neurotransmission under both physiological and pathological conditions, including neuropathic pain and drug-induced dyskinesia."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "13", "end_ref": "26"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nIn summary, while the provided body of work richly delineates the multifaceted contributions of RGS9‐2 and its associated complexes in governing GPCR signal termination and downstream neuronal adaptations, it does not supply any functional insights regarding SNORD115-48. Thus, drawing from these abstracts, no information can be attributed to SNORD115-48—its function remains described elsewhere as typical for small nucleolar RNAs, where it is often implicated in RNA modification and processing events.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Izabela Sokal, Guang Hu, Yan Liang, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Essential role for RGS9 in opiate action."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.2232594100"}], "href": "https://doi.org/10.1073/pnas.2232594100"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14595021"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14595021"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "Gabor Keresztes, Kirill A Martemyanov, Claudia M Krispel, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Expression patterns of the RGS9-1 anchoring protein R9AP in the chicken and mouse suggest multiple roles in the nervous system."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell Neurosci (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/s1044-7431(03)00231-8"}], "href": "https://doi.org/10.1016/s1044-7431(03"}, {"type": "t", "text": "00231-8) PMID: "}, {"type": "a", "children": [{"type": "t", "text": "14664818"}], "href": "https://pubmed.ncbi.nlm.nih.gov/14664818"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Javier Garzón, María Rodríguez-Muñoz, Almudena López-Fando, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "D2 dopamine receptors colocalize regulator of G-protein signaling 9-2 (RGS9-2) via the RGS9 DEP domain, and RGS9 knock-out mice develop dyskinesias associated with dopamine pathways."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.2840-04.2005"}], "href": "https://doi.org/10.1523/JNEUROSCI.2840-04.2005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "15728856"}], "href": "https://pubmed.ncbi.nlm.nih.gov/15728856"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Kassi Psifogeorgou, Paraskevi Papakosta, Scott J Russo, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RGS9-2 is a negative modulator of mu-opioid receptor function."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurochem (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1471-4159.2007.04812.x"}], "href": "https://doi.org/10.1111/j.1471-4159.2007.04812.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17725581"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17725581"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Jacqueline Blundell, Chau V Hoang, Bryan Potts, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Motor coordination deficits in mice lacking RGS9."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Brain Res (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.brainres.2007.11.017"}], "href": "https://doi.org/10.1016/j.brainres.2007.11.017"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "18073128"}], "href": "https://pubmed.ncbi.nlm.nih.gov/18073128"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Garret R Anderson, Rafael Lujan, Arthur Semenov, et al. 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"}, {"type": "b", "children": [{"type": "t", "text": "Functional comparison of RGS9 splice isoforms in a living cell."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2008)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.0808941106"}], "href": "https://doi.org/10.1073/pnas.0808941106"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19098104"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19098104"}]}, {"type": "r", "ref": 13, "children": [{"type": "t", "text": "Marie E Burns, Edward N Pugh "}, {"type": "b", "children": [{"type": "t", "text": "RGS9 concentration matters in rod phototransduction."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biophys J (2009)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bpj.2009.06.037"}], "href": "https://doi.org/10.1016/j.bpj.2009.06.037"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19751658"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19751658"}]}, {"type": "r", "ref": 14, "children": [{"type": "t", "text": "James J Mancuso, Yan Qian, Cheng Long, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Distribution of RGS9-2 in neurons of the mouse striatum."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurochem (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1111/j.1471-4159.2009.06488.x"}], "href": "https://doi.org/10.1111/j.1471-4159.2009.06488.x"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "19912469"}], "href": "https://pubmed.ncbi.nlm.nih.gov/19912469"}]}, {"type": "r", "ref": 15, "children": [{"type": "t", "text": "Ekaterina Posokhova, Vladimir Uversky, Kirill A Martemyanov "}, {"type": "b", "children": [{"type": "t", "text": "Proteomic identification of Hsc70 as a mediator of RGS9-2 degradation by in vivo interactome analysis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Proteome Res (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1021/pr901022m"}], "href": "https://doi.org/10.1021/pr901022m"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20095651"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20095651"}]}, {"type": "r", "ref": 16, "children": [{"type": "t", "text": "Meenakshi Sharma, Jeremy Celver, Abraham Kovoor "}, {"type": "b", "children": [{"type": "t", "text": "Regulator of G protein signaling 9-2 (RGS9-2) mRNA is up regulated during neuronal differentiation of mouse embryonic stem cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurosci Lett (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neulet.2011.05.021"}], "href": "https://doi.org/10.1016/j.neulet.2011.05.021"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21616123"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21616123"}]}, {"type": "r", "ref": 17, "children": [{"type": "t", "text": "Maria Martha Papachatzaki, Zsófia Antal, Dimitra Terzi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RGS9-2 modulates nociceptive behaviour and opioid-mediated synaptic transmission in the spinal dorsal horn."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurosci Lett (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.neulet.2011.06.033"}], "href": "https://doi.org/10.1016/j.neulet.2011.06.033"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "21741448"}], "href": "https://pubmed.ncbi.nlm.nih.gov/21741448"}]}, {"type": "r", "ref": 18, "children": [{"type": "t", "text": "Rolf Herrmann, Bowa Lee, Vadim Y Arshavsky "}, {"type": "b", "children": [{"type": "t", "text": "RGS9 knockout causes a short delay in light responses of ON-bipolar cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0027573"}], "href": "https://doi.org/10.1371/journal.pone.0027573"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22096596"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22096596"}]}, {"type": "r", "ref": 19, "children": [{"type": "t", "text": "Jeffrey L Waugh, Jeremy Celver, Meenakshi Sharma, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Association between regulator of G protein signaling 9-2 and body weight."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2011)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0027984"}], "href": "https://doi.org/10.1371/journal.pone.0027984"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22132185"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22132185"}]}, {"type": "r", "ref": 20, "children": [{"type": "t", "text": "Keqiang Xie, Ikuo Masuho, Cameron Brand, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The complex of G protein regulator RGS9-2 and Gβ(5) controls sensitization and signaling kinetics of type 5 adenylyl cyclase in the striatum."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Signal (2012)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1126/scisignal.2002922"}], "href": "https://doi.org/10.1126/scisignal.2002922"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "22932702"}], "href": "https://pubmed.ncbi.nlm.nih.gov/22932702"}]}, {"type": "r", "ref": 21, "children": [{"type": "t", "text": "Kathy Busse, Rainer Strotmann, Karl Strecker, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Adaptive gene regulation in the Striatum of RGS9-deficient mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0092605"}], "href": "https://doi.org/10.1371/journal.pone.0092605"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24663062"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24663062"}]}, {"type": "r", "ref": 22, "children": [{"type": "t", "text": "Dimitra Terzi, Sevasti Gaspari, Lefteris Manouras, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RGS9-2 modulates sensory and mood related symptoms of neuropathic pain."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Neurobiol Learn Mem (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.nlm.2014.08.005"}], "href": "https://doi.org/10.1016/j.nlm.2014.08.005"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25150149"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25150149"}]}, {"type": "r", "ref": 23, "children": [{"type": "t", "text": "Vasiliki Mitsi, Dimitra Terzi, Immanuel Purushothaman, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RGS9-2--controlled adaptations in the striatum determine the onset of action and efficacy of antidepressants in neuropathic pain states."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Proc Natl Acad Sci U S A (2015)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1073/pnas.1504283112"}], "href": "https://doi.org/10.1073/pnas.1504283112"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26305935"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26305935"}]}, {"type": "r", "ref": 24, "children": [{"type": "t", "text": "Brian S Muntean, Kirill A Martemyanov "}, {"type": "b", "children": [{"type": "t", "text": "Association with the Plasma Membrane Is Sufficient for Potentiating Catalytic Activity of Regulators of G Protein Signaling (RGS) Proteins of the R7 Subfamily."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M115.713446"}], "href": "https://doi.org/10.1074/jbc.M115.713446"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "26811338"}], "href": "https://pubmed.ncbi.nlm.nih.gov/26811338"}]}, {"type": "r", "ref": 25, "children": [{"type": "t", "text": "Chenghui Song, Garret R Anderson, Laurie P Sutton, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Selective Role of RGS9-2 in Regulating Retrograde Synaptic Signaling of Indirect Pathway Medium Spiny Neurons in Dorsal Striatum."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Neurosci (2018)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1523/JNEUROSCI.0493-18.2018"}], "href": "https://doi.org/10.1523/JNEUROSCI.0493-18.2018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30006367"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30006367"}]}, {"type": "r", "ref": 26, "children": [{"type": "t", "text": "Paola Bonsi, Giulia Ponterio, Valentina Vanni, et al. "}, {"type": "b", "children": [{"type": "t", "text": "RGS9-2 rescues dopamine D2 receptor levels and signaling in "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "DYT1"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " dystonia mouse models."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "EMBO Mol Med (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.15252/emmm.201809283"}], "href": "https://doi.org/10.15252/emmm.201809283"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30552094"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30552094"}]}]}]}
Synonyms HBII-52-48
NCBI Gene ID 100033822
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Download Associations
Predicted Functions View SNORD115-48's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD115-48's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD115-48's ARCHS4 Predicted Functions.

Functional Associations

SNORD115-48 has 309 functional associations with biological entities spanning 3 categories (molecular profile, cell line, cell type or tissue, gene, protein or microRNA) extracted from 11 datasets.

Click the + buttons to view associations for SNORD115-48 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-48 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-48 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD115-48 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD115-48 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD115-48 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of SNORD115-48 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Kinase Perturbations kinase perturbations changing expression of SNORD115-48 gene from the GEO Signatures of Differentially Expressed Genes for Kinase Perturbations dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD115-48 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD115-48 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of SNORD115-48 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD115-48 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.