SNORD22 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 22
Description Predicted to be involved in RNA processing. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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Notably, these studies delineate how acetylation events modulate protein stability, protein–protein interactions, and transcriptional control in processes ranging from embryogenesis and bone development to oxidative stress response and adipocyte thermogenesis."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "1", "end_ref": "4"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nDespite the extensive exploration of these protein acetylation pathways, none of the publications provide any experimental data, discussion, or indication regarding the biological role of SNORD22. In these reports, attention is exclusively given to protein regulators—such as ARD1 and Naa10—and their molecular targets, including transcription factors and key metabolic regulators (e.g., Runx2, HIF-1α, and Pgc1α), with no mention of SNORD22 or any small nucleolar RNAs."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "5", "end_ref": "7"}]}, {"type": "t", "text": "\n"}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nFurthermore, while some studies extend the examination of N-terminal acetylation to developmental and morphological outcomes in mouse models—elucidating compensatory mechanisms (e.g., the existence of Naa12 alongside Naa10) and the impact of altered acetylation on embryonic viability and differentiation—the specific function of SNORD22 remains unaddressed across these diverse contexts."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "8", "end_ref": "12"}]}, {"type": "t", "text": " \nThus, while these abstracts collectively enrich our understanding of acetyltransferase-mediated regulation in mammalian systems, they do not provide any insights into the function or regulatory mechanisms associated with SNORD22.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Naoaki Sugiura, Suzanne M Adams, Roderick A Corriveau "}, {"type": "b", "children": [{"type": "t", "text": "An evolutionarily conserved N-terminal acetyltransferase complex associated with neuronal development."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2003)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M301218200"}], "href": "https://doi.org/10.1074/jbc.M301218200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "12888564"}], "href": "https://pubmed.ncbi.nlm.nih.gov/12888564"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Se-Hee Kim, Jeong Ae Park, Jin Hyoung Kim, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Characterization of ARD1 variants in mammalian cells."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2006)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2005.12.018"}], "href": "https://doi.org/10.1016/j.bbrc.2005.12.018"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16376303"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16376303"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Kwang-Hoon Chun, Seung-Ju Cho, Joon-Seok Choi, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Differential regulation of splicing, localization and stability of mammalian ARD1235 and ARD1225 isoforms."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2007)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2006.11.131"}], "href": "https://doi.org/10.1016/j.bbrc.2006.11.131"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "17161380"}], "href": "https://pubmed.ncbi.nlm.nih.gov/17161380"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Mi-Ni Lee, Shi-Nai Lee, Se-Hee Kim, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Roles of arrest-defective protein 1(225) and hypoxia-inducible factor 1alpha in tumor growth and metastasis."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Natl Cancer Inst (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/jnci/djq026"}], "href": "https://doi.org/10.1093/jnci/djq026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20194889"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20194889"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "S-H Shin, H Yoon, Y-S Chun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Arrest defective 1 regulates the oxidative stress response in human cells and mice by acetylating methionine sulfoxide reductase A."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Cell Death Dis (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/cddis.2014.456"}], "href": "https://doi.org/10.1038/cddis.2014.456"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25341044"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25341044"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Haejin Yoon, Hye-Lim Kim, Yang-Sook Chun, et al. "}, {"type": "b", "children": [{"type": "t", "text": "NAA10 controls osteoblast differentiation and bone formation as a feedback regulator of Runx2."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Nat Commun (2014)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/ncomms6176"}], "href": "https://doi.org/10.1038/ncomms6176"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "25376646"}], "href": "https://pubmed.ncbi.nlm.nih.gov/25376646"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Huiyu Xu, Yong Han, Bing Liu, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Unc-5 homolog B (UNC5B) is one of the key downstream targets of N-α-Acetyltransferase 10 (Naa10)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Sci Rep (2016)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1038/srep38508"}], "href": "https://doi.org/10.1038/srep38508"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "27910960"}], "href": "https://pubmed.ncbi.nlm.nih.gov/27910960"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Chen-Cheng Lee, Shih-Huan Peng, Li Shen, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The Role of N-α-acetyltransferase 10 Protein in DNA Methylation and Genomic Imprinting."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2017.08.025"}], "href": "https://doi.org/10.1016/j.molcel.2017.08.025"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28943313"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28943313"}]}, {"type": "r", "ref": 9, "children": [{"type": "t", "text": "Daisuke Takekoshi, Yoshimi Tokuzawa, Masahiro Sakanaka, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The N-end rule pathway enzyme Naa10 supports epiblast specification in mouse embryonic stem cells by modulating FGF/MAPK."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "In Vitro Cell Dev Biol Anim (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1007/s11626-019-00341-8"}], "href": "https://doi.org/10.1007/s11626-019-00341-8"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "30993557"}], "href": "https://pubmed.ncbi.nlm.nih.gov/30993557"}]}, {"type": "r", "ref": 10, "children": [{"type": "t", "text": "Chen-Cheng Lee, Yi-Chun Shih, Ming-Lun Kang, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Naa10p Inhibits Beige Adipocyte-Mediated Thermogenesis through N-α-acetylation of Pgc1α."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Cell (2019)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.molcel.2019.07.026"}], "href": "https://doi.org/10.1016/j.molcel.2019.07.026"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "31422874"}], "href": "https://pubmed.ncbi.nlm.nih.gov/31422874"}]}, {"type": "r", "ref": 11, "children": [{"type": "t", "text": "Hyae Yon Kweon, Mi-Ni Lee, Max Dorfel, et al. "}, {"type": "b", "children": [{"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "Naa12"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " compensates for "}, {"type": "a", "children": [{"type": "t", "text": "i"}], "href": "i"}, {"type": "t", "text": "Naa10"}, {"type": "a", "children": [{"type": "t", "text": "/i"}], "href": "/i"}, {"type": "t", "text": " in mice in the amino-terminal acetylation pathway."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Elife (2021)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.7554/eLife.65952"}], "href": "https://doi.org/10.7554/eLife.65952"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "34355692"}], "href": "https://pubmed.ncbi.nlm.nih.gov/34355692"}]}, {"type": "r", "ref": 12, "children": [{"type": "t", "text": "Gholson J Lyon, Joseph Longo, Andrew Garcia, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Evaluating possible maternal effect lethality and genetic background effects in Naa10 knockout mice."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS One (2024)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.pone.0301328"}], "href": "https://doi.org/10.1371/journal.pone.0301328"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "38713657"}], "href": "https://pubmed.ncbi.nlm.nih.gov/38713657"}]}]}]}
Synonyms U22, RNU22
NCBI Gene ID 9304
API
Download Associations
Predicted Functions View SNORD22's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD22's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD22's ARCHS4 Predicted Functions.

Functional Associations

SNORD22 has 1,465 functional associations with biological entities spanning 7 categories (molecular profile, organism, disease, phenotype or trait, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 23 datasets.

Click the + buttons to view associations for SNORD22 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles tissues with high or low expression of SNORD22 gene relative to other tissues from the Allen Brain Atlas Adult Human Brain Tissue Gene Expression Profiles dataset.
Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles tissues with high or low expression of SNORD22 gene relative to other tissues from the Allen Brain Atlas Prenatal Human Brain Tissue Gene Expression Profiles dataset.
BioGPS Mouse Cell Type and Tissue Gene Expression Profiles cell types and tissues with high or low expression of SNORD22 gene relative to other cell types and tissues from the BioGPS Mouse Cell Type and Tissue Gene Expression Profiles dataset.
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD22 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD22 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of SNORD22 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
CTD Gene-Disease Associations diseases associated with SNORD22 gene/protein from the curated CTD Gene-Disease Associations dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD22 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD22 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD22 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
ESCAPE Omics Signatures of Genes and Proteins for Stem Cells PubMedIDs of publications reporting gene signatures containing SNORD22 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing SNORD22 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of SNORD22 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations transcription factor perturbations changing expression of SNORD22 gene from the GEO Signatures of Differentially Expressed Genes for Transcription Factor Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Viral Infections virus perturbations changing expression of SNORD22 gene from the GEO Signatures of Differentially Expressed Genes for Viral Infections dataset.
GTEx Tissue-Specific Aging Signatures tissue samples with high or low expression of SNORD22 gene relative to other tissue samples from the GTEx Tissue-Specific Aging Signatures dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD22 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD22 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of SNORD22 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
KnockTF Gene Expression Profiles with Transcription Factor Perturbations transcription factor perturbations changing expression of SNORD22 gene from the KnockTF Gene Expression Profiles with Transcription Factor Perturbations dataset.
MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations gene perturbations changing expression of SNORD22 gene from the MSigDB Signatures of Differentially Expressed Genes for Cancer Gene Perturbations dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD22 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
TCGA Signatures of Differentially Expressed Genes for Tumors tissue samples with high or low expression of SNORD22 gene relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.