SNORD33 Gene

HGNC Family Non-coding RNAs
Name small nucleolar RNA, C/D box 33
Description Predicted to be involved in RNA processing. Predicted to act upstream of or within glucose metabolic process; insulin secretion; and reactive oxygen species metabolic process. Predicted to be located in nucleolus. [provided by Alliance of Genome Resources, Mar 2025]
Summary
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For example, one report examines a 15‐kDa selenoprotein (Sep15) and its critical, cysteine‐rich domain–mediated interaction with UDP‐glucose:glycoprotein glucosyltransferase (GT), which is instrumental in ER protein processing and quality control."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "1"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nOther abstracts detail the essential role of UGGT1 in monitoring glycoprotein folding within the ER, including its involvement in monoglucosylating misfolded proteins to facilitate chaperone binding, a process that contributes to cellular proteostasis and can influence disease outcomes such as viral replication."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "2"}]}, {"type": "t", "text": " Additional studies extend these findings by implicating UGGT1 in enhancing viral replication in the context of enterovirus A71 infection, in mediating hormonal effects on protein quality control, and even in modulating the trafficking of proinsulin thereby affecting insulin secretion."}, {"type": "fg", "children": [{"type": "fg_fs", "start_ref": "4", "end_ref": "7"}]}, {"type": "t", "text": ""}]}, {"type": "t", "text": "\n\n"}, {"type": "p", "children": [{"type": "t", "text": "\nAdditional work in the collection examines unrelated pathways—including the protection of the cerebellum from bilirubin toxicity mediated by Abcb1—but again, none of these investigations mention or shed light on a role for SNORD33."}, {"type": "fg", "children": [{"type": "fg_f", "ref": "8"}]}, {"type": "t", "text": " Thus, while the abstracts offer significant insights into the mechanisms governing glycoprotein processing and ER homeostasis via specialized protein factors, they provide no evidence or discussion regarding SNORD33’s function.\n"}]}, {"type": "rg", "children": [{"type": "r", "ref": 1, "children": [{"type": "t", "text": "Vyacheslav M Labunskyy, Andrew D Ferguson, Dmitri E Fomenko, et al. "}, {"type": "b", "children": [{"type": "t", "text": "A novel cysteine-rich domain of Sep15 mediates the interaction with UDP-glucose:glycoprotein glucosyltransferase."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Biol Chem (2005)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1074/jbc.M508685200"}], "href": "https://doi.org/10.1074/jbc.M508685200"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "16129668"}], "href": "https://pubmed.ncbi.nlm.nih.gov/16129668"}]}, {"type": "r", "ref": 2, "children": [{"type": "t", "text": "Sean P Ferris, Nikita S Jaber, Maurizio Molinari, et al. "}, {"type": "b", "children": [{"type": "t", "text": "UDP-glucose:glycoprotein glucosyltransferase (UGGT1) promotes substrate solubility in the endoplasmic reticulum."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Mol Biol Cell (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1091/mbc.E13-02-0101"}], "href": "https://doi.org/10.1091/mbc.E13-02-0101"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "23864712"}], "href": "https://pubmed.ncbi.nlm.nih.gov/23864712"}]}, {"type": "r", "ref": 3, "children": [{"type": "t", "text": "Bradley R Pearse, Taku Tamura, Johan C Sunryd, et al. "}, {"type": "b", "children": [{"type": "t", "text": "The role of UDP-Glc:glycoprotein glucosyltransferase 1 in the maturation of an obligate substrate prosaposin."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "J Cell Biol (2010)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1083/jcb.200912105"}], "href": "https://doi.org/10.1083/jcb.200912105"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "20498017"}], "href": "https://pubmed.ncbi.nlm.nih.gov/20498017"}]}, {"type": "r", "ref": 4, "children": [{"type": "t", "text": "Peng-Nien Huang, Jia-Rong Jheng, Jamie J Arnold, et al. "}, {"type": "b", "children": [{"type": "t", "text": "UGGT1 enhances enterovirus 71 pathogenicity by promoting viral RNA synthesis and viral replication."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "PLoS Pathog (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1371/journal.ppat.1006375"}], "href": "https://doi.org/10.1371/journal.ppat.1006375"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28545059"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28545059"}]}, {"type": "r", "ref": 5, "children": [{"type": "t", "text": "María B Prados, Julio J Caramelo, Silvia E Miranda "}, {"type": "b", "children": [{"type": "t", "text": "Progesterone regulates the expression and activity of two mouse isoforms of the glycoprotein folding sensor UDP-Glc: glycoprotein glucosyltransferase (UGGT)."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochim Biophys Acta (2013)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbamcr.2013.09.022"}], "href": "https://doi.org/10.1016/j.bbamcr.2013.09.022"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "24140206"}], "href": "https://pubmed.ncbi.nlm.nih.gov/24140206"}]}, {"type": "r", "ref": 6, "children": [{"type": "t", "text": "Jaeyong Cho, Masaki Hiramoto, Yuka Masaike, et al. "}, {"type": "b", "children": [{"type": "t", "text": "UGGT1 retains proinsulin in the endoplasmic reticulum in an arginine dependent manner."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2020)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2020.04.158"}], "href": "https://doi.org/10.1016/j.bbrc.2020.04.158"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "32423812"}], "href": "https://pubmed.ncbi.nlm.nih.gov/32423812"}]}, {"type": "r", "ref": 7, "children": [{"type": "t", "text": "Jaeyong Cho, Yoji Tsugawa, Takeshi Imai "}, {"type": "b", "children": [{"type": "t", "text": "R1526 residue in arginine/proinsulin binding domain of UGGT1 is involved in proinsulin binding."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Biochem Biophys Res Commun (2022)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1016/j.bbrc.2022.05.060"}], "href": "https://doi.org/10.1016/j.bbrc.2022.05.060"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "35613513"}], "href": "https://pubmed.ncbi.nlm.nih.gov/35613513"}]}, {"type": "r", "ref": 8, "children": [{"type": "t", "text": "Luka Bockor, Giulia Bortolussi, Simone Vodret, et al. "}, {"type": "b", "children": [{"type": "t", "text": "Modulation of bilirubin neurotoxicity by the Abcb1 transporter in the Ugt1-/- lethal mouse model of neonatal hyperbilirubinemia."}]}, {"type": "t", "text": " "}, {"type": "i", "children": [{"type": "t", "text": "Hum Mol Genet (2017)"}]}, {"type": "t", "text": " DOI: "}, {"type": "a", "children": [{"type": "t", "text": "10.1093/hmg/ddw375"}], "href": "https://doi.org/10.1093/hmg/ddw375"}, {"type": "t", "text": " PMID: "}, {"type": "a", "children": [{"type": "t", "text": "28025333"}], "href": "https://pubmed.ncbi.nlm.nih.gov/28025333"}]}]}]}
Synonyms RNU33, U33
NCBI Gene ID 26818
API
Download Associations
Predicted Functions View SNORD33's ARCHS4 Predicted Functions.
Co-expressed Genes View SNORD33's ARCHS4 Predicted Functions.
Expression in Tissues and Cell Lines View SNORD33's ARCHS4 Predicted Functions.

Functional Associations

SNORD33 has 1,440 functional associations with biological entities spanning 5 categories (molecular profile, functional term, phrase or reference, chemical, cell line, cell type or tissue, gene, protein or microRNA) extracted from 18 datasets.

Click the + buttons to view associations for SNORD33 from the datasets below.

If available, associations are ranked by standardized value

Dataset Summary
CCLE Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD33 gene relative to other cell lines from the CCLE Cell Line Gene CNV Profiles dataset.
ChEA Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD33 gene from the CHEA Transcription Factor Binding Site Profiles dataset.
ChEA Transcription Factor Targets transcription factors binding the promoter of SNORD33 gene in low- or high-throughput transcription factor functional studies from the CHEA Transcription Factor Targets dataset.
COSMIC Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD33 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.
ENCODE Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD33 gene from the ENCODE Histone Modification Site Profiles dataset.
ENCODE Transcription Factor Binding Site Profiles transcription factor binding site profiles with transcription factor binding evidence at the promoter of SNORD33 gene from the ENCODE Transcription Factor Binding Site Profiles dataset.
ENCODE Transcription Factor Targets transcription factors binding the promoter of SNORD33 gene in ChIP-seq datasets from the ENCODE Transcription Factor Targets dataset.
ESCAPE Omics Signatures of Genes and Proteins for Stem Cells PubMedIDs of publications reporting gene signatures containing SNORD33 from the ESCAPE Omics Signatures of Genes and Proteins for Stem Cells dataset.
GeneSigDB Published Gene Signatures PubMedIDs of publications reporting gene signatures containing SNORD33 from the GeneSigDB Published Gene Signatures dataset.
GEO Signatures of Differentially Expressed Genes for Gene Perturbations gene perturbations changing expression of SNORD33 gene from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.
GEO Signatures of Differentially Expressed Genes for Small Molecules small molecule perturbations changing expression of SNORD33 gene from the GEO Signatures of Differentially Expressed Genes for Small Molecules dataset.
GTEx Tissue Gene Expression Profiles tissues with high or low expression of SNORD33 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.
GTEx Tissue Sample Gene Expression Profiles tissue samples with high or low expression of SNORD33 gene relative to other tissue samples from the GTEx Tissue Sample Gene Expression Profiles dataset.
JASPAR Predicted Transcription Factor Targets transcription factors regulating expression of SNORD33 gene predicted using known transcription factor binding site motifs from the JASPAR Predicted Transcription Factor Targets dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles cell lines with high or low copy number of SNORD33 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.
Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles cell lines with high or low expression of SNORD33 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene Expression Profiles dataset.
Roadmap Epigenomics Histone Modification Site Profiles histone modification site profiles with high histone modification abundance at SNORD33 gene from the Roadmap Epigenomics Histone Modification Site Profiles dataset.
WikiPathways Pathways 2014 pathways involving SNORD33 protein from the Wikipathways Pathways 2014 dataset.